# 26 - 97 Carcinoma of Unknown Primary

### 97 Carcinoma of Unknown Primary

osteoporosis, the cortical bone may be preserved, whereas cortical 
bone destruction is usually noted with metastatic cancer.
TREATMENT
Metastatic Bone Disease
Treatment of metastatic bone disease depends on the underlying 
malignancy and the symptoms. Some metastatic bone tumors are 
curable (lymphoma, Hodgkin’s lymphoma), and others are treated 
with palliative intent. Pain may be relieved by local radiation 
therapy. Hormonally responsive tumors are responsive to hormone 
inhibition (antiandrogens for prostate cancer, antiestrogens for 
breast cancer). Strontium-89, samarium-153, and radium-223 are 
bone-seeking radionuclides that can exert antitumor effects and 
relieve symptoms. Denosumab, a monoclonal antibody that binds 
to RANK ligand, inhibits osteoclastic activity and increases bone 
mineral density. Bisphosphonates such as pamidronate may relieve 
pain and inhibit bone resorption, thereby maintaining bone min­
eral density and reducing risk of fractures in patients with osteo­
lytic metastases from breast cancer and multiple myeloma. Careful 
monitoring of serum electrolytes and creatinine is recommended. 
Monthly administration prevents bone-related clinical events and 
may reduce the incidence of bone metastases in women with breast 
cancer. When the integrity of a weight-bearing bone is threatened 
by an expanding metastatic lesion that is refractory to radiation 
therapy, prophylactic internal fixation is indicated. Overall survival 
is related to the prognosis of the underlying tumor. Bone pain at the 
end of life is particularly common; an adequate pain relief regimen 
including sufficient amounts of narcotic analgesics is required. The 
management of hypercalcemia is discussed in Chap. 422.
■
■FURTHER READING
Alvarez RA et al: Optimization of the therapeutic approach to patients 
with sarcoma: Delphi consensus. Sarcoma 2019:4351308, 2019.
Ballinger ML et al: Monogenic and polygenic determinants of sarcoma 
risk: An international genetic study. Lancet Oncol 17:1261, 2016.
Beird HC et al: Osteosarcoma. Nat Rev Dis Primers 8:77, 2022.
Gounder M et al: Nirogacestat, a γ-secretase inhibitor for desmoid 
tumors. N Engl J Med 388:898, 2023.
Meyer M, Seetharam M: First-line therapy for metastatic soft tissue 
sarcoma. Curr Treat Options Oncol 20:6, 2019.
Pasquali S, Gronchi A: Neoadjuvant chemotherapy in soft tissue 
sarcomas: Latest evidence and clinical implications. Ther Adv Med 
Oncol 9:415, 2017.
Patel S, Reichardt P: An updated review of the treatment landscape 
for advanced gastrointestinal stromal tumors. Cancer 127:2185, 2021.
Ratan R, Patel SR: Chemotherapy for soft tissue sarcoma. Cancer 
122:2952, 2016.
Wagner MJ et al: Chemotherapy for bone sarcoma in adults. J Oncol 
Pract 12:208, 2016.
Kanwal Raghav, James L. Abbruzzese

Carcinoma of Unknown 

Primary
Carcinoma (or cancer) of unknown primary (CUP) is a biopsy-proven 
malignancy for which the anatomic site of origin remains unidenti­
fied after a standardized detailed diagnostic evaluation. CUP is one 
of the 10 most frequently diagnosed cancers globally, accounting for 
3–5% of all malignancies. Most investigators limit CUP to epithelial 

or undifferentiated cancers and do not include lymphomas, metastatic 
melanomas, and metastatic sarcomas because these cancers have spe­
cific histology and stage-based management guidelines, even in the 
absence of a primary site. CUP can occur in patients of all age groups 
including adolescents and young adults.

The emergence of sophisticated imaging, robust immunohisto­
chemistry (IHC), and genomic and proteomic tools has challenged 
the “unknown” designation. Additionally, effective targeted therapies 
in several cancers and tissue-agnostic biomarker-driven therapies 
have endorsed a change in paradigm from empiricism to a personal­
ized approach to CUP management. The reasons cancers present as 
CUP remain unclear. One hypothesis is that the primary tumor either 
regresses after seeding the metastasis or remains so small that it is 
not detected. It is possible that CUP falls on the continuum of cancer 
presentation where the primary has been contained or eliminated by 
the natural body defenses, including the immune system. Alterna­
tively, CUP may represent a specific malignant event that results in 
an increase in metastatic spread or survival relative to the primary. 
Whether the CUP metastases truly define a clone that is genetically 
and phenotypically unique to this diagnosis remains to be determined.
Since liver is a common site of CUP presentation, intrahepatic chol­
angiocarcinoma (ICC) can be often misdiagnosed as CUP. Of note, the 
incidence of ICC is increasing, whereas at the same time, that of CUP 
is declining. Improvements in diagnostic technologies including nextgeneration sequencing and other molecular techniques and awareness 
among clinicians to differentiate the two are possibly contributing to an 
increased recognition and incidence of ICC.
CHAPTER 97
Carcinoma of Unknown Primary 
CUP BIOLOGY
Studies looking for unique signature abnormalities in CUP tumors 
have not been positive. Abnormalities in chromosomes 1 and 12 and 
other complex cytogenetic abnormalities have been reported. Aneu­
ploidy has been described in 70% of CUP patients with metastatic 
adenocarcinoma or undifferentiated carcinoma. The overexpression 
of various genes, including RAS, BCL2 (40%), HER2 (11%), and P53 
(26–53%), has been identified in CUP samples, but they are found in 
many other malignancies. The extent of angiogenesis in CUP relative to 
that in metastases from known primaries has also been evaluated, but 
no consistent findings have emerged. Although current comprehen­
sive genomic profiling efforts may help identify targeted therapeutic 
approaches to improve outcomes for this disease as discussed below, 
they have failed thus far to reveal a distinct molecular signature. More 
comprehensive and integrated multiomic efforts are needed to provide 
insights into CUP biology through recognition of molecular aberra­
tions that specifically drive metastatic growth.
APPROACH TO THE PATIENT
Carcinoma (or Cancer) of Unknown Primary
Initial CUP evaluation has two goals: search for the primary or 
“putative primary” tumor based on clinicopathologic evaluation 
of the metastases and determine the extent of disease. Focused 
evaluation directed by clinicopathologic cues allows for judicious 
and efficient use of diagnostic tests. Obtaining a thorough medical 
history from CUP patients is essential, including paying particular 
attention to risk factors, prior surgeries, and family medical history 
to assess potential hereditary cancers. Adequate physical examina­
tion, including a digital rectal examination in men and breast and 
pelvic examinations in women, should be performed based on clini­
cal presentation. Finally, all patients with CUP, in the absence of 
contraindication, must undergo a computed tomography (CT) scan 
of chest, abdomen, and pelvis as a part of their standard workup.
■
■ROLE OF SERUM TUMOR MARKERS AND 
CYTOGENETICS
Most tumor markers, including carcinoembryonic antigen (CEA), 
CA-125, CA 19-9, and CA 15-3, are nonspecific and not helpful in 
determining the primary site. Men who present with adenocarcinoma

and predominant osteoblastic metastasis should undergo a prostatespecific antigen (PSA) test. In patients with undifferentiated or poorly 
differentiated carcinoma (especially with a midline tumor), elevated 
β-human chorionic gonadotropin (β-hCG) and α fetoprotein (AFP) 
levels suggest the possibility of an extragonadal germ cell (testicular) 
tumor. With the availability of advanced IHC, cytogenetic studies are 
rarely needed.

■
■ROLE OF IMAGING STUDIES
In the absence of contraindications, a baseline intravenous (IV) con­
trast CT scan of the chest, abdomen, and pelvis is the standard of 
care. This helps to search for the primary tumor, evaluate the extent of 
disease, and select the most accessible biopsy site. With precise imag­
ing and reporting, latent primary cancers, defined as appearance of a 
new primary cancer after a latent period of several months to years, is 
uncommon and seen in ≤5% of CUP patients, usually in patients with 
very indolent presentations and/or highly responsive metastatic cancers 
that allows a latent primary to emerge (grow) over time.
Mammography should be performed in women who present with 
metastatic adenocarcinoma, especially in those with isolated axillary 
lymphadenopathy. Magnetic resonance imaging (MRI) of the breast 
can be considered in patients with axillary adenopathy and suspected 
occult primary breast carcinoma following a negative mammography 
and ultrasound. The results of these imaging modalities can influence 
surgical management; a negative MRI of the breast predicts a low 
tumor yield at mastectomy.
PART 4
Oncology and Hematology
A conventional workup for a squamous cell carcinoma and cervical 
CUP (neck lymphadenopathy with no known primary tumor) includes 
a CT scan or MRI and invasive studies, including indirect and direct 
laryngoscopy, bronchoscopy, and upper endoscopy. Ipsilateral (or bilat­
eral) staging tonsillectomy has been recommended for these patients. 
18-Fluorodeoxyglucose positron emission tomography (18-FDG-PET) 
scans are useful in this patient population and may help guide the 
biopsy; determine the extent of disease; facilitate the appropriate treat­
ment, including planning radiation fields; and help with disease sur­
veillance. Several studies have evaluated the utility of PET in patients 
with squamous cervical CUP, and head and neck primary tumors were 
identified in ~21–30%.
The diagnostic contribution of PET to the evaluation of other CUP 
presentations (outside of the neck adenopathy indication) remains 
controversial and is not routinely recommended. PET-CT can be help­
ful for patients with bone metastases and those deemed candidates 
for aggressive multimodality therapy (surgical intervention/radiation) 
such as patients with solitary metastatic disease because the identifica­
tion of disease in addition to the solitary metastatic site may affect 
treatment planning.
Invasive studies, including upper endoscopy, colonoscopy, and 
bronchoscopy, should be limited to symptomatic patients or those with 
laboratory, imaging, or pathologic abnormalities that suggest that these 
techniques will result in a high yield in finding a primary cancer.
CK7     CK20
CK7+     CK20+
CK7+     CK20–
CK7–     CK20+
CK7–     CK20–
Lung adenocarcinoma
Breast carcinoma
Thyroid carcinoma
Endometrial carcinoma
Cervical carcinoma 
Salivary gland carcinoma 
Cholangiocarcinoma
Pancreatic carcinoma
Urothelial tumors 
Ovarian mucinous 
    adenocarcinoma
Pancreatic 
    adenocarcinoma
Cholangiocarcinoma
FIGURE 97-1  Approach to cytokeratin (CK7 and CK20) markers used in adenocarcinoma of unknown primary.

TABLE 97-1  Major Histologies in Carcinoma (Cancer) of Unknown 
Primary
HISTOLOGY
PROPORTION, %
Well to moderately differentiated adenocarcinoma

Squamous cell cancer

Poorly differentiated adenocarcinoma, poorly 
differentiated carcinoma

Neuroendocrine

Undifferentiated malignancy

■
■ROLE OF PATHOLOGIC STUDIES
A detailed pathologic examination of the most accessible biopsied 
tissue specimen is mandatory in CUP patients. Pathologic evaluation 
typically consists of hematoxylin and eosin stains and IHC tests. The 
importance of adequate tissue acquisition cannot be overemphasized 
in CUP. In addition to pathologic evaluation, tissue is also needed for 
molecular profiling, which can aid in identifying biomarkers suggest­
ing the primary site for effective therapeutics including targeted agents, 
immunotherapy, and clinical trials.
Light Microscopy Evaluation 
Adequate tissue obtained prefer­
ably by excisional biopsy or core needle biopsy (instead of only a fineneedle aspiration) is stained with hematoxylin and eosin and subjected 
to light microscopic examination. On light microscopy, 60–65% of 
CUP is adenocarcinoma, and 5% is squamous cell carcinoma. The 
remaining 30–35% is poorly differentiated adenocarcinoma, poorly 
differentiated carcinoma, or poorly differentiated neoplasm. A small 
percentage of lesions are diagnosed as neuroendocrine cancers (2%), 
mixed tumors (adenosquamous or sarcomatoid carcinomas), or undif­
ferentiated neoplasms (Table 97-1).
Role of IHC Analysis 
IHC stains are peroxidase-labeled antibod­
ies against specific tumor antigens that are used to define tumor lin­
eage. The number of available IHC stains is ever-increasing. However, 
a tiered and uniform approach to tissue evaluation in the CUP setting 
is lacking. For CUP cases, more is not necessarily better, and IHC 
stains should be used in conjunction with the patient’s clinical presen­
tation and imaging studies to select the best therapy. Communication 
between the clinician and pathologist is essential. No stain is 100% 
sensitive or specific, and under-/overinterpretation should be avoided. 
Poor differentiation, even in known primary tumors, decreases sensi­
tivity of hallmark IHC markers. PSA and thyroglobulin tissue markers, 
which are positive in prostate and thyroid cancer, respectively, are two 
of the most specific markers. However, these cancers rarely present as 
CUP, so the yield of these tests may be low. Figure 97-1 delineates a 
simple algorithm for immunohistochemical staining in CUP cases. 
Table 97-2 lists additional tests that may be useful to further define 
the tumor lineage. A more comprehensive algorithm may improve the 
diagnostic accuracy but can make the process complex and increase 
Colorectal carcinoma 
Merkel cell carcinoma
Hepatocellular carcinoma
Renal cell carcinoma
Prostate carcinoma
Squamous cell and small-
    cell lung carcinoma
Head and neck carcinoma

TABLE 97-2  Select Immunohistochemical Stains Useful in the 
Diagnosis of CUP
COMMONLY CONSIDERED IHC TO ASSIST IN 
DIFFERENTIAL DIAGNOSIS OF CUPa
LIKELY PRIMARY PROFILE
Breast
ER, GCDFP-15, mammaglobin, HER2/neu, GATA3
Ovarian/müllerian
ER, WT1, CK7, PAX8, PAX2
Lung adenocarcinoma
TTF-1; nuclear staining, napsin A, SP-A1
Germ cell
β-hCG, AFP, OCT3/4, CKIT, CD30 (embryonal), 
SALL4
Prostate
PSA, α-methylacyl CoA racemase/P504S (AMACR/
P504S), P501S (prostein), PSMA, NKX3-1
Intestinal
CK7, CK20, CDX-2, CEA
Neuroendocrine
Chromogranin, synaptophysin, CD56
Sarcoma
Desmin (desmoid tumors), factor VIII 
(angiosarcomas), CD31, smooth muscle actin 
(leiomyosarcoma), MyoD1 (rhabdomyosarcoma)
Renal
RCC, CD10, PAX8, CD10
Hepatocellular carcinoma
Hep Par-1, Arg-1, glypican-3
Melanoma
S100, SOX-10, vimentin, HMB-45, tyrosinase, 
melan-A
Urothelial
CK7, CK20, thrombomodulin, uroplakin III
Mesothelioma
Calretinin, WT1, D2-40, mesothelin
Lymphoma
LCA, CD3, CD4, CD5, CD20, CD45
SCC
p63, p40 (lung SCC), CK5/6
aPatterns emerging from coexpression of stains are better than individual stains to 
suggest putative primary site. Even with optimization, no IHC panel is 100% sensitive 
or specific (e.g., ovarian mucinous carcinoma can exhibit positivity with intestinal 
markers).
Abbreviations: AFP, α fetoprotein; Arg-1, arginase-1; β-hCG, β-human chorionic 
gonadotropin; CEA, carcinoembryonic antigen; CUP, carcinoma of unknown 
primary; ER, estrogen receptor; GCDFP-15, gross cystic disease fibrous protein-15; 
IHC, immunohistochemistry; LCA, leukocyte common antigen; PSA, prostatespecific antigen; PSMA, prostate-specific membrane antigen; SCC, squamous cell 
carcinoma; SP-A1, surfactant protein A precursor; TTF, thyroid transcription factor; 
WT, Wilms’ tumor.
cost. With the use of IHC markers, electron microscopic analysis, 
which is time-consuming and expensive, is rarely performed today.
There are >20 subtypes of cytokeratin (CK) intermediate filaments 
with different molecular weights and differential expression in various 
cell types and cancers. Monoclonal antibodies to specific CK subtypes 
have been used to help classify tumors according to their site of origin; 
commonly used CK stains in adenocarcinoma CUP are CK7 and 
CK20. CK7 is found in tumors of the lung, ovary, endometrium, breast, 
and upper gastrointestinal tract including pancreaticobiliary cancers, 
whereas CK20 is normally expressed in the gastrointestinal epithelium, 
urothelium, and Merkel cells. The nuclear CDX-2 transcription fac­
tor, which is the product of a homeobox gene necessary for intestinal 
organogenesis, is often used to aid in the diagnosis of gastrointestinal 
adenocarcinomas. However, CDX-2 positivity can be seen with enteric 
or mucinous differentiation in tumors from diverse primary sites (e.g., 
mucinous ovarian cancers).
Thyroid transcription factor 1 (TTF-1) nuclear staining is frequently 
positive in lung and thyroid cancers. Approximately 68% of adeno­
carcinomas and 25% of squamous cell lung cancers stain positive for 
TTF-1, which helps differentiate a lung primary tumor from metastatic 
adenocarcinoma in a pleural effusion, the mediastinum, or the lung 
parenchyma.
Gross cystic disease fibrous protein-15 (GCDFP-15), a 15-kDa 
monomer protein, is a marker of apocrine differentiation that is 
detected in 62–72% of breast carcinomas. GATA3 is being increasingly 
used in the CUP setting when there is concern for a breast primary and 
can be particularly useful as a marker for metastatic breast carcinoma, 
especially triple-negative and metaplastic carcinomas, which lack spe­
cific endocrine markers of mammary origin. UROIII, high-molecularweight cytokeratin, thrombomodulin, and CK20 are the markers used 
to diagnose lesions of urothelial origin.

IHC performs the best when used in groups that give rise to patterns 
that are strongly indicative of certain profiles. For example, the TTF-1/
CK7+ and CK20+/CDX-2+/CK7− phenotypes have been reported 
as very suggestive of lung and lower gastrointestinal cancer profiles, 
respectively. Despite their practical utility, these patterns have not 
been validated prospectively in CUP patients. IHC is not without its 
limitations; several factors affect tissue antigenicity (antigen retrieval, 
specimen processing, and fixation), interpretation of stains in tumor 
(nuclear, cytoplasmic, membrane) versus normal tissue, inter- and 
intraobserver variability, variable performance of different antibodies 
said to recognize the same antigen, and tissue heterogeneity and inad­
equacy (given small biopsy sizes). Communication with the patholo­
gist is critical to determine if acquisition of additional tissue will be 
beneficial in the pathologic evaluation. Pathologic features should 
not always supersede clinical or radiologic findings when considering 
testing for biomarkers of therapeutic response (e.g., epidermal growth 
factor receptor [EGFR], ALK mutations, human epidermal growth fac­
tor receptor 2 [HER2]).
Role of Cancer Classifier Molecular Profiling 
In the absence 
of a known primary, developing therapeutic strategies for CUP is chal­
lenging. The current diagnostic yield with imaging and immunochem­
istry is ~20–30% for CUP patients. To reduce diagnostic uncertainty, 
sophisticated molecular analytics have been applied to CUP samples. 
These include gene expression profiling, messenger RNA (mRNA), 
microRNA, and genetic and epigenetic profiling to classify CUP.

CHAPTER 97
Gene expression profiles are most commonly generated using quan­
titative reverse transcriptase polymerase chain reaction (RT-PCR) or 
DNA microarray. Neural network programs are then used to develop 
predictive algorithms from the gene expression profiles. Typically, 
a training set of gene profiles from known cancers (preferably from 
metastatic sites) is used to train the software. Comprehensive gene 
expression databases that have become available for common malig­
nancies are then applied to CUP samples, and the program can then be 
used to predict the putative origin of a CUP sample.
Carcinoma of Unknown Primary 
mRNA- or microRNA-based tissue of origin cancer classifier assays 
have also been studied in prospective and retrospective CUP trials. Other 
assays such as DNA methylation profiling predicted a primary cancer in 
87% of 216 CUP patients. Incorporation of machine learning and nextgeneration sequencing has furthered prediction of these classifiers.
Despite the sophistication of the cancer classifier molecular assays, 
most of the CUP studies have evaluated assay performance, although 
the challenge with validating the accuracy of an assay for CUP is 
that, by definition, the primary cancer diagnosis cannot be verified. 
Thus, current estimates of tissue of origin test accuracy have relied 
on indirect metrics, including comparison with pathology/IHC, clini­
cal presentation, appearance of latent primaries, and autopsies. Using 
these measures, the assays suggest a plausible primary in ~70–80% of 
patients studied. Three outcomes-based studies have been performed. 
First, a single-arm study reported a median survival of 12.5 months 
for patients who received assay-directed site-specific therapy. Second, 
a phase 2 trial of site-specific therapy, including molecularly targeted 
therapy, based on predicted tumor site from an algorithm using gene 
expression and alteration profile showed a 1-year survival of 53.1%. 
However, two randomized clinical trials evaluating site-specific therapy 
directed by gene expression profiling versus empirical chemotherapy 
with either paclitaxel plus carboplatin or gemcitabine plus cisplatin 
failed to show a significant improvement in survival with this approach. 
Firm conclusions of therapeutic impact cannot be drawn from these 
studies given the sample size, design, statistical biases, confounding 
variables including use of subsequent lines of (empiric) therapy, and 
heterogeneity of the CUP cancers. Additional studies are needed to bet­
ter understand the clinical impact of tissue of origin profiling tools and 
how these assays complement IHC and help guide therapy.
Role of Next-Generation Sequencing 
A significant push is 
being made toward personalized medicine across all cancer types 
with the goal of identifying driver mutation(s) in a patient who can 
be treated with targeted agents independent of the site of origin. A 
retrospective study of 200 CUP tumor specimens reported on genomic

alterations using the hybrid capture–based FoundationOne assay. The 
authors reported that a large number of CUP samples (85%) harbored 
at least one clinically relevant genomic alteration with the potential to 
influence and personalize therapy. The mean number of genomic alter­
ations was 4.2 per tumor, and the most common genetic alterations 
included TP53 (55%), KRAS (20%), CDKN2A (19%), and ARID1A 
(11%). The adenocarcinoma CUP tumors were more frequently driven 
by genetic alterations in the receptor tyrosine kinase (RTK)/Ras/mitogenactivated protein kinase (MAPK) signaling pathway than nonadeno­
carcinoma CUP tumors. Although druggable genetic lesions seen in 
CUP are comparable to those in known primary cancer databases, 
whether molecularly stratified approaches for CUP will successfully 
improve outcomes remains to be seen and clinical trials are needed. 
In a single-arm phase 2 study of 97 patients with molecularly targeted 
therapy, five patients were found to have targetable EGFR mutations. 
Of these, four patients were treated with afatinib, an anti-EGFR drug, 
and two patients achieved a progression-free survival of >6 months. It 
is anticipated that second- and third-generation drugs targeting EGFR 
mutations are likely to be even more effective. The emerging use of 
assays looking for circulating tumor DNA (ctDNA), so-called liquid 
biopsies, has been increasingly useful within known tumor types and 
has stirred interest in their potential utility in CUP (Chap. 503).

Ongoing histology and cellular-context agnostic prospective clinical 
trials are studying the presence of actionable mutations and matching 
patients to the right targeted drug. As this strategy gains traction, CUP 
would be a natural fit for genomic alteration–based targeted therapy 
independent of tumor site. Established tumor-agnostic therapies such 
as immune checkpoint inhibitors (pembrolizumab) for microsatellite 
instability high (MSI-H) or deficient mismatch repair (dMMR) tumors 
or tumors with high tumor mutation burden (TMB) and NTRK inhibi­
tors for NTRK fusion–positive tumors can help a small minority of 
CUP patients.
PART 4
Oncology and Hematology
TREATMENT
Carcinoma (or Cancer) of Unknown Primary 
GENERAL CONSIDERATIONS
The treatment of CUP continues to evolve, albeit slowly. The median 
survival of most patients with disseminated CUP is ~6–10 months. 
Adenocarcinoma 
Poorly differentiated adenocarcinoma CUP
IHC to suggest “favored” primary
Isolated 
axillary nodes 
in women
Bone-only 
metastases in 
men (blastic)
Solitary site 
of metastasis
Peritoneal 
carcinoma
Disseminated 
cancer, 2 or 
more sites 
involved
Check PSA (in 
tumor and 
serum). If 
elevated, Rx as 
prostate cancer.
If resectable, resect 
with or without prior 
C or CRT. If 
unresectable, C, RT, 
or CRT depending 
on location of tumor
Breast MRI if 
mammogram 
and ultrasound 
are negative
If PSA not 
elevated, C or 
RT as indicated
MRI (+). Breast surgery 
or radiation. C and/or 
hormonal therapy for 
breast cancer.
MRI (–). No 
surgery, consider 
radiation. C for 
breast cancer.
FIGURE 97-2  Treatment algorithm for adenocarcinoma and poorly differentiated adenocarcinoma of unknown primary (CUP). C, chemotherapy; CRT, chemoradiation; 
GI, gastrointestinal; IHC, immunohistochemistry; MRI, magnetic resonance imaging; PSA, prostate-specific antigen; RT, radiation.

Squamous cell
CUP
Disseminated,
visceral
metastases
Metastatic inguinal
adenopathy
Metastatic cervical 
adenopathy
Directed invasive
tests as needed
Perineal exam,
anoscopy if needed.
Pelvic examination
in women. PET is
optional.
Triple endoscopy,
consider tonsillectomy.
CT neck and chest.
PET is optional.
If no extra-cervical
disease—neck
dissection followed by
adjuvant RT vs RT
alone. C for bulky
disease.
If localized, lymph 
node dissection, 
followed by local RT
in select patients
C in good 
performance 
status patients. 
RT as indicated.
FIGURE 97-3  Treatment algorithm for squamous cell carcinoma of unknown 
primary (CUP). C, chemotherapy; CT, computed tomography; PET, positron emission 
tomography; RT, radiation.
Systemic chemotherapy is the primary treatment modality in most 
patients with disseminated disease, but the careful integration 
of surgery, radiation therapy, and even periods of observation is 
important in the overall management of this condition (Figs. 97-2 
and 97-3). Prognostic factors include performance status, site and 
number of metastases, response to chemotherapy, and serum lactate 
dehydrogenase (LDH) levels. Culine and colleagues developed a 
prognostic model using performance status and serum LDH levels, 
which allowed the assignment of patients into two subgroups with 
divergent outcomes. Raghav and colleagues developed a prognostic 
nomogram to provide individualized survival estimates for patients 
with CUP based on baseline gender, Eastern Cooperative Oncology 
If not suggestive of 
primary peritoneal, 
GI workup for 
primary. C, if good 
performance status.
If suggestive of 
primary 
peritoneal 
cancer, treat as 
ovarian cancer
C, if good 
performance 
status

Group performance status, histology, number of metastatic sites, 
and neutrophil-lymphocyte ratio. Future prospective trials using 
this prognostic model are warranted. Clinically, some CUP diagno­
ses fall into a favorable prognostic subset. Others, including those 
with disseminated CUP, have a more unfavorable prognosis.
TREATMENT OF FAVORABLE CUP SUBSETS 
Women with Isolated Axillary Adenopathy  Women with isolated 
axillary adenopathy with adenocarcinoma or carcinoma are usually 
treated for stage II or III breast cancer based on pathologic findings. 
These patients should undergo a breast MRI if mammogram and 
ultrasound are negative. Radiation therapy to the ipsilateral breast 
is indicated if the MRI of the breast is positive. Chemotherapy and/
or hormonal therapy are indicated based on patient’s age (pre­
menopausal or postmenopausal), nodal disease bulk, and hormone 
receptor and HER2 status (Chap. 84). It is important to verify 
that the pathology suggests a breast cancer profile (morphology, 
IHC breast markers including estrogen receptor, mammaglobin, 
GCDFP-15, GATA3, HER2 gene expression) before embarking on 
a breast cancer therapeutic program. 
Women with Peritoneal Carcinomatosis  The term primary peri­
toneal papillary serous carcinoma (PPSC) has been used to describe 
CUP with carcinomatosis with the pathologic and laboratory 
(elevated CA-125 antigen) characteristics of ovarian cancer but no 
ovarian primary tumor identified on transvaginal sonography or 
laparotomy. Studies suggest that ovarian cancer and PPSC, which 
are both of müllerian origin, have similar gene expression profiles. 
Like patients with ovarian cancer, patients with PPSC are candi­
dates for cytoreductive surgery, followed by adjuvant taxane- and 
platinum-based chemotherapy. In one retrospective study of 
258 women with peritoneal carcinomatosis who had undergone 
cytoreductive surgery and chemotherapy, 22% of patients had a 
complete response to chemotherapy; the median survival duration 
was 18 months (range 11–24 months). However, not all peritoneal 
carcinomatosis in women is PPSC. Careful pathologic evaluation can 
help diagnose a colon cancer profile (CDX-2+, CK20+, CK7−) or a 
pancreaticobiliary cancer or even a mislabeled peritoneal mesothe­
lioma (calretinin, D2-40 positive; BerEp4, MOC-31 negative). 
Poorly Differentiated Carcinoma with Midline Adenopathy 
(Chap. 93)  Men with poorly differentiated or undifferentiated 
carcinoma who present with midline adenopathy should be evalu­
ated for extragonadal germ cell malignancy. If diagnosed and 
treated as such, they often experience a good response to treatment 
with platinum-based combination chemotherapy. Response rates 
of >50% have been noted, and long-term survival rates of 10–15% 
have been reported. Older patients, especially smokers, who present 
with mediastinal adenopathy are more likely to have a lung or head 
and neck cancer profile. 
Neuroendocrine Cancer (Chap. 89)  Low-grade neuroendocrine 
tumor (NET) often has an indolent course, and treatment decisions 
are based on symptoms and tumor bulk. Urine 5-HIAA and serum 
chromogranin may be elevated and can be followed as markers. 
Often the patient is treated with somatostatin analogues alone for 
hormone-related symptoms (diarrhea, flushing, nausea). Specific 
local therapies or systemic therapy would only be indicated if the 
patient is symptomatic with local pain secondary to significant 
growth of the metastasis or the hormone-related symptoms are 
not controlled with endocrine therapy. Novel therapy options have 
demonstrated benefit in patients with low-grade NET, including 
sunitinib (which targets the vascular endothelial growth factor 
pathway), everolimus (which inhibits the mammalian target of 
rapamycin), and lutetium-177 dotatate (a somatostatin peptide 
receptor radioligand). Patients with high-grade NET are treated 
with platinum-based doublet therapy; 20–25% show a complete 
response, and up to 10% patients with limited/oligo presentations 
survive for >5 years. Some degree of neuroendocrine differentiation 
can be seen in diverse poorly differentiated carcinomas. 

Squamous Cell Carcinoma Presenting as Neck Adenopathy  Patients 
with early-stage squamous cell carcinoma involving the cervical 
lymph nodes are candidates for node dissection and radiation 
therapy, which can result in long-term survival. The role of che­
motherapy in these patients is undefined, although chemoradiation 
therapy or induction chemotherapy is often used and is beneficial 
in bulky N2/N3 lymph node disease. 

Solitary Metastatic Sites  Patients with solitary metastases can 
also experience good treatment outcomes. Some patients who pres­
ent with locoregional disease are candidates for aggressive trimo­
dality (chemotherapy, radiation, and surgery) management—both 
prolonged disease-free survival and, occasionally, cure are possible. 
Men with Blastic Skeletal Metastases and Elevated PSA 
(Chap. 92)  Blastic bone-only metastasis is a rare presentation, and 
elevated serum PSA or tumor staining with PSA may provide con­
firmatory evidence of prostate cancer in these patients. Those with 
elevated levels are candidates for hormonal or other therapy for 
prostate cancer, although it is important to rule out other primary 
tumors (lung most common). 
MANAGEMENT OF DISSEMINATED CUP
Patients who present with liver, brain, and adrenal metastatic 
disease usually have a poor prognosis. Patients with peritoneal 
carcinomatosis secondary to metastatic adenocarcinoma have a 
broad differential diagnosis, which includes mainly gastrointestinal 
cancers including gastric, appendiceal, colon, and pancreaticobili­
ary cancers.
CHAPTER 97
Traditionally, platinum-based combination chemotherapy regi­
mens have been used to treat CUP. Several broadly used regimens 
have been studied in the past two decades; these include paclitaxelcarboplatin, gemcitabine-cisplatin, gemcitabine-oxaliplatin, and 
irinotecan and fluoropyrimidine-based therapies. These chemo­
therapeutic agents used as empiric regimens have shown response 
rates of 25–40%, and their use obtains median survival times of 
6–13 months.
Carcinoma of Unknown Primary 
Outside of favorable subsets, there is a small group of patients 
with a “definitive” IHC profile. These patients usually have a single 
diagnosis based on their clinicopathologic presentation and are 
often treated for the putative primary tumor. This does not guar­
antee a response, although it increases the probability of response 
when select drugs are chosen from a class of drugs known to be 
effective in that cancer type. Efforts should be made to search for 
biomarkers of response to tumor-agnostic effective therapies such 
as immunotherapy for MSI-H/dMMR tumors. Patients who do 
not fall into those categories are candidates for broad-spectrum 
platinum-based regimens, clinical trials, and additional trial-based 
genomic and proteomic tests. Today, we do not have many effective 
drugs for several CUP cancer profiles, and treatments overlap for 
some cancers. Immunotherapy has been an area of active interest 
due to robust and durable responses in cancers with known prima­
ries and has shown some activity in CUP. However, biomarkers of 
response and immune-sensitive subsets need to be defined within 
CUP.
SUMMARY
Patients with CUP should undergo a directed diagnostic search for 
the primary tumor based on clinical and pathologic data. Subsets of 
patients have prognostically favorable disease, as defined by clinical 
or histologic criteria, and may substantially benefit from aggressive 
treatment; in these patients, prolonged survival can be expected. How­
ever, for most patients who present with advanced CUP, the prognosis 
remains poor with early resistance to available cytotoxic therapy. The 
current focus has shifted away from empirical chemotherapeutic trials 
to understanding the metastatic phenotype, tissue of origin profiling in 
select patients, and next-generation sequencing to identify actionable 
mutations in CUP patients. As novel therapies evolve in cancers with 
known primaries, investigations to assess their value in CUP will likely 
have a positive impact on management of CUP patients.