# 71 - 186 Antimycobacterial Agents

### 186 Antimycobacterial Agents

and ethambutol has been successful. Therapy is prolonged, gen­
erally continuing for 12 months after culture conversion; typically, 
a course lasts for at least 18 months. Other drugs with activity 
against MAC organisms include IV and aerosolized aminogly­
cosides, fluoroquinolones, and clofazimine. In elderly patients, 
rifabutin can exert significant toxicity. However, with only mod­
est efforts, most antimycobacterial regimens are well tolerated by 
most patients. Resection of cavitary lesions or severely bronchi­
ectatic segments has been advocated for some patients, especially 
those with macrolide-resistant infections. The success of therapy 
for pulmonary MAC infections depends on whether disease is 
nodular or cavitary and on whether it is early or advanced, rang­
ing from 20 to 80%.

M. kansasii lung disease is similar to tuberculosis in many ways 
and is also effectively treated with isoniazid (300 mg/d), rifampin 
(600 mg/d), and ethambutol (15 mg/kg per day). Other drugs with 
very high-level activity against M. kansasii include macrolides, 
fluoroquinolones, and aminoglycosides. Treatment should con­
tinue until cultures have been negative for at least 1 year. In most 
instances, M. kansasii infection is easily cured. Bulky, severe, necro­
tizing M. kansasii lymphadenopathy, especially in the mediastinum, 
is strongly associated with GATA2 deficiency.
Rapidly growing mycobacteria pose special therapeutic prob­
lems. Extrapulmonary disease in an immunocompetent host is 
usually due to inoculation (e.g., via surgery, injections, or trauma) 
or to line infection and is often treated successfully with a macrolide 
and another drug (with the choice based on in vitro susceptibility), 
along with removal of the offending focus. In contrast, pulmonary 
disease, especially that caused by M. abscessus, is extremely dif­
ficult to cure. Repeated courses of treatment are usually effective in 
reducing the infectious burden and symptoms. Therapy generally 
includes a macrolide along with an IV-administered agent such as 
amikacin, a carbapenem, cefoxitin, or tigecycline. Other oral agents 
(used according to in vitro susceptibility testing and tolerance) 
include fluoroquinolones, doxycycline, linezolid, and the newer 
tetracycline family drugs, omadacycline and eravacycline. Because 
nontuberculous mycobacterial infections are chronic, care must be 
taken in the long-term use of drugs with neurotoxicities, such as 
linezolid and ethambutol. Prophylactic pyridoxine has been sug­
gested in these cases. Durations of therapy for M. abscessus lung 
disease are difficult to predict because so many cases are chronic 
and require intermittent therapy. Expert consultation and manage­
ment are strongly recommended.
PART 5
Infectious Diseases
Once recognized, M. marinum infection is highly responsive 
to antimicrobial therapy and is cured relatively easily with any 
combination of a macrolide, ethambutol, and a rifamycin. Therapy 
should be continued for 1–2 months after clinical resolution of iso­
lated soft-tissue disease; tendon and bone involvement may require 
longer courses in light of clinical evolution. Other drugs with 
activity against M. marinum include sulfonamides, trimethoprimsulfamethoxazole, doxycycline, and minocycline.
Treatment of the other NTM is less well defined, but macrolides 
and aminoglycosides are usually effective, with other agents added 
as indicated. Expert consultation is strongly encouraged for difficult 
or unusual infections due to NTM.
■
■PROGNOSIS
The outcomes of nontuberculous mycobacterial infections are closely 
tied to the underlying condition (e.g., IFN-γ/IL-12 pathway defect, 
cystic fibrosis) and can range from recovery to death. With no or inad­
equate treatment, symptoms and signs can be debilitating, including 
persistent cough, fever, anorexia, and severe lung destruction. With 
treatment, patients typically regain strength and energy. The optimal 
duration of therapy when NTM persist in sputum is unknown, but 
treatment in this situation can be prolonged. In general, for severe 
underlying immunodeficiencies, hematopoietic stem cell transplanta­
tion is recommended and may be helpful in the resolution of severe 
mycobacterial disease.

■
■GLOBAL CONSIDERATIONS
In many countries, pulmonary tuberculosis is diagnosed by smear 
alone, which is also the method used for monitoring of response and 
relapse. However, examination of mycobacteria from the affected 
“relapsed” patients shows that a significant proportion of isolates are 
actually NTM. Overall, as rates of tuberculosis decline, the proportion 
of positive smears caused by NTM will increase. Advances in specia­
tion will distinguish tuberculosis from nontuberculous mycobacterial 
infections and thereby affect rates of assumed relapse and resistance, 
leading to more targeted and appropriate therapy.
■
■FURTHER READING
Blakney RA et al: Incidence of nontuberculous mycobacterial pul­
monary infection, by ethnic group, Hawaii, USA, 2005-2019. Emerg 
Infect Dis 28:1543, 2022.
Daley CL et al: Treatment of nontuberculous mycobacterial pulmo­
nary disease: An official ATS/ERS/ESCMID/IDSA Clinical Practice 
Guideline. Clin Infect Dis 71:905, 2020.
Holland SM et al: Case 28-2017. A 13-month-old girl with pneumo­
nia and a 33-year-old woman with hip pain. N Engl J Med 377:1077, 
2017.
Hong GH et al: Natural history and evolution of anti-interferon-γ 
autoantibody-associated immunodeficiency syndrome in Thailand 
and the United States. Clin Infect 71:53, 2020.
Lange C et al: Consensus management recommendations for less 
common non-tuberculous mycobacterial pulmonary diseases. Lancet 
Infect Dis 22:e178, 2022.
Marras TK et al: Relative risk of all-cause mortality in patients with 
nontuberculous mycobacterial lung disease in a US managed care 
population. Respir Med 145:80, 2018.
Marshall JE et al: Nontuberculous mycobacteria testing and culture 
positivity in the United States. BMC Infect Dis 24:288, 2024.
Prevots DR et al: Global epidemiology of nontuberculous mycobacte­
rial pulmonary disease: A review. Clin Chest Med 44:675, 2023.
Spinner MA et al: GATA2 deficiency: A protean disorder of hemato­
poiesis, lymphatics, and immunity. Blood 123:809, 2014.
Szymanski EP et al: Pulmonary nontuberculous mycobacterial infec­
tion. A multisystem, multigenic disease. Am J Respir Crit Care Med 
192:618, 2015.
Divya Reddy, Sebastian G. Kurz, 

Max R. O’Donnell

Antimycobacterial Agents
Agents used for the treatment of mycobacterial infections, includ­
ing tuberculosis (TB), leprosy, and infections due to nontuberculous 
mycobacteria (NTM), are administered in multiple-drug regimens for 
prolonged courses. Currently, >180 species of mycobacteria have been 
identified, the majority of which do not cause disease in humans. While 
the overall incidence of disease caused by Mycobacterium tuberculosis 
has been declining, there has been a recent increase in incidence in the 
context of the COVID-19 pandemic, and TB remains a leading cause of 
morbidity and mortality in low- and middle-income countries—especially 
in sub-Saharan Africa where TB/HIV co-infection is common. Wellorganized infrastructure for early diagnosis, treatment of TB infection 
and disease, and development of effective drug regimens and vaccines 
remain vital to the global strategies for TB control (Chaps. 183 and 
485). Infections with NTM have gained in clinical prominence in the 
United States and other developed countries. These largely environ­
mental organisms often establish infection in immunocompromised 
patients or in persons with structural lung disease.

TABLE 186-1  Regimens for the Treatment of Latent Tuberculosis Infection in Adults
REGIMEN
SCHEDULE
DURATION
COMMENTS
Isoniazid plus 
rifapentine
900 mg (15 mg/kg) 
weekly plus 900 mg (for 
weight >50 kg) weekly
3 months
Directly observed therapy is recommended for once-weekly treatment in HIV-positive and 
-negative individuals. This regimen may be supplemented with pyridoxine (25–50 mg/d).
Rifampin
600 mg/d (10 mg/kg)
4 months
Recommended in HIV-negative individuals and in children. Data on effectiveness in HIV-positive 
patients are unavailable.
Isoniazid plus 
rifampin
300 mg/d (5 mg/kg) plus 
600 mg/d (10 mg/kg)
3 months
Risk of hepatotoxicity may be higher with the combination regimen compared to that of the 
individual drugs.
Isoniazid
300 mg/d (5 mg/kg)
Alternative: 900 mg 
twice weekly (15 mg/kg)
6–9 months (6 months 
acceptable)
Supplement with pyridoxine (25–50 mg daily)
6 months’ duration strongly recommended for HIV-negative patients and conditional for 

HIV-positive patients. 9 months may be more effective but with higher risk of hepatic toxicity. 

Twice-weekly regimens require directly observed therapy.
Source: TR Sterling et al: Guidelines for the treatment of latent tuberculosis infection: Recommendations from the National Tuberculosis Controllers Association and CDC, 
2020. MMWR Recomm Rep 69:1, 2020.
TUBERCULOSIS
■
■GENERAL PRINCIPLES
The earliest recorded human case of TB dates back 9000 years. Early 
treatment modalities, such as bloodletting, were replaced by the 
sanatorium movement in the late nineteenth century, which focused 
on fresh air, nutrition, and bedrest to treat consumptive patients and 
came with the benefit of isolating infected individuals. The isolation 
of streptomycin from Streptomyces griseus in 1943 launched the era of 
antibiotic treatment for TB. Over subsequent decades, the discovery 
of additional agents and the use of multiple-drug regimens allowed 
progressive shortening of the treatment course from years to as little 
as 6 months for drug-susceptible TB. Latent TB infection (LTBI) and 
active TB disease are diagnosed by history, physical examination, 
radiographic imaging, tuberculin skin test, interferon-γ release assays, 
acid-fast staining, mycobacterial cultures, and/or new molecular 
diagnostics. LTBI is treated with isoniazid plus rifapentine (weekly 
for 3 months), rifampin (daily for 4 months), isoniazid plus rifampin 
(daily for 3 months), or isoniazid (optimally daily or twice weekly for 
6−9 months) (Table 186-1). The 3-month, weekly regimen of iso­
niazid with rifapentine is currently the regimen of choice in children 

>2 years of age and in all adults including HIV-positive individuals. 
The regimen is not recommended for pregnant women and for persons 
with hypersensitivity reactions to isoniazid or rifampin. Shorter 
duration rifamycin-based regimens (rifampin alone for 4 months or for 
3 months in combination with isoniazid) are currently preferred for the 
treatment of LTBI over isoniazid for 6−9 months in adults and children 
due to their effectiveness, safety, and tolerability. Caution is advised in 
HIV-positive individuals due to potential for drug interactions, lack of 
definitive data on effectiveness, and the possibility of subclinical TB 
disease that could facilitate the development of rifampin resistance.
TABLE 186-2  Simplified Approach to Treatment of Active Tuberculosis (TB) in Adults
CULTURE 
RESULTS
INTENSIVE PHASE
CONTINUATION PHASE
EXTENSION OF TOTAL TREATMENT
Culture-positive, 
drug-susceptible
HRZE for 2 months, dailya 
or 3 times per week (with 
dose adjustment)
HR for 4 months, daily or 5 days per week
or
HR for 4 months, 3 times per weekb 

(with dose adjustment)
Culture-negative
HRZE for 2 months
HR for 2 months, daily or 2 or 3 times per 
weekd
Continuation phase extended to 4 months if the patient is infected with HIV
Extrapulmonary, 
drug-susceptible
HRZE for 2 months
HR for 4–7 months, daily or 5 days per 
weeke
Continuation phase extended to 10 months in TB meningitis; 7 months 
recommended by some authorities for bone/joint TB
aDaily treatment is preferred; however, thrice-weekly therapy in the intensive phase (with or without an initial 2 weeks of daily therapy) may be considered in patients who 
are not infected with HIV and are at low risk of relapse (i.e., in pulmonary tuberculosis caused by drug-susceptible organisms that, at the start of treatment, is noncavitary 
and/or smear negative). bUse regimen with caution in HIV patients and/or those with cavitary disease, as missed doses can lead to treatment failure, relapse, and acquired 
drug resistance. cCulture conversion is prolonged if it occurs beyond 2 months. dTwice-weekly treatment regimens are not recommended in patients infected with HIV and 
those with cavitary pulmonary disease suspected to be TB. eStandard daily 6-month TB treatment regimen is considered to be adequate for most forms of extrapulmonary 
TB, including miliary TB. For TB meningitis, the addition of glucocorticoids is recommended.
Abbreviations: E, ethambutol; H, isoniazid; R, rifampin; Z, pyrazinamide.
Sources: Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America: Clinical practice guidelines: Treatment of 
drug-susceptible tuberculosis. Clin Infect Dis 63:e147, 2016.

Completions rates of a self-administered, once-weekly regimen of 
isoniazid plus rifapentine for 3 months with monthly monitoring were 
found to be noninferior to those seen with directly observed therapy 
(DOT) in the United States, and thus, this regimen is considered an 
acceptable strategy for treating LTBI in countries with a focus on sec­
ondary prevention of TB disease. Recently, a 1-month daily regimen of 
rifapentine and isoniazid in HIV-positive individuals was found to be 
noninferior to 9 months of isoniazid; this regimen is included in the 
2020 World Health Organization (WHO) LTBI treatment guidelines.
For active or suspected TB disease, clinical factors, including HIV 
co-infection, symptom duration, radiographic appearance, and public 
health concerns about TB transmission, drive diagnostic testing and 
treatment initiation. Confirmation of active TB relies on detection 
of M. tuberculosis via culture or molecular testing. A combination of 
drugs is used for the treatment of TB disease (Table 186-2). For drugsusceptible disease, a standardized regimen is used with an intensive 
phase consisting of four drugs—isoniazid (H), rifampin (R), pyrazin­
amide (Z), and ethambutol (E)—given for 2 months, which is followed 
by a continuation phase of isoniazid and rifampin for 4 months, for 
a total treatment duration of 6 months. U.S. guidelines recommend 
extension of the continuation phase to 7 months (for a total treatment 
duration of 9 months) for patients with cavitary disease; if the 2-month 
course of pyrazinamide is not completed; or if sputum cultures remain 
positive beyond 2 months of treatment (delayed culture conversion), 
which also warrants evaluation for development of drug resistance.
CHAPTER 186
Antimycobacterial Agents
In 2020, a large multinational randomized trial showed that a 
4-month regimen composed of daily rifapentine, isoniazid, pyrazin­
amide, and moxifloxacin for 8 weeks, followed by rifapentine, isonia­
zid, and moxifloxacin for 9 weeks, was noninferior to the traditional 
6-month HRZE regimen. Patients with HIV and a CD4 count >100 
were included. This regimen now has conditional recommendation by 
Continuation phase extended to 7 months if 2 months of Z is not completed, 
if the patient is infected with HIV and is not receiving antiretroviral therapy, 
or if culture conversion is prolonged and/or cavitation is evident on chest 
radiography (U.S. guidelines)c

the WHO and U.S. guidelines. Remaining concerns are higher daily pill 
burden, potential side effects from prolonged use of moxifloxacin, and 
need for fluoroquinolone resistance testing in areas where resistance 
is prevalent.

Treatment of TB in patients co-infected with HIV poses signifi­
cant challenges, but some progress is being made. To improve sur­
vival, current recommendations include initiation of antiretroviral 
therapy (ART) in HIV patients co-infected with M. tuberculosis within 

2 weeks of the initiation of treatment for TB (except TB meningitis) if 
the CD4+ T-cell count is ≤50/μL and by 8–12 weeks of TB treatment 
initiation if the CD4+ T-cell count is ≥50/μL. Interactions of rifampin 
with protease inhibitors or nonnucleoside reverse transcriptase inhibi­
tors can be significant and require close monitoring and dose adjust­
ments. Reassuringly, a recent study comparing the safety and efficacy 
of rifampin for 4 months in patients with LTBI showed that it was as 
effective as isoniazid for 9 months and was also well tolerated and safe 
for treatment in persons living with HIV. Rifabutin is an alternative 
drug of choice in HIV patients co-infected with M. tuberculosis, as it is 
a less potent cytochrome P3A inhibitor than rifampin. The TB immune 
reconstitution inflammatory syndrome (IRIS) may appear as early as 
1 week after initiation of ART and manifests as paradoxical worsen­
ing or unmasking of existing TB infection. Conservative management 
consists of continued administration of ART and TB medications. 
However, severe or debilitating IRIS has been treated in reported case 
series with varying doses of glucocorticoids. A randomized, doubleblind, placebo-controlled trial showed that a 4-week course of pred­
nisone significantly reduced the need for hospitalization and hastened 
symptom improvement and quality of life in TB IRIS. Intermittent 
antimycobacterial therapy in patients infected with HIV and M. tuber­
culosis has been associated with low plasma levels of several key TB 
PART 5
Infectious Diseases
TABLE 186-3  Monitoring and Clinical Management of Tuberculosis (TB) Treatment in Adultsa
DRUG
ASSESSMENT
MANAGEMENT
LTBI Treatment
With hepatic risk factorsb, check ALT and bilirubin at baseline. If ALT is ≥3× ULN or total bilirubin is >2× ULN, defer treatment and reevaluate.
Isoniazid
Determine whether hepatic risk factors 
are present. If so, obtain baseline and 
periodic ALT and bilirubin values
If ALT is 5× ULN (or 3× ULN with symptoms)c or if bilirubin reaches jaundice levels (usually >2× ULN), 
interrupt treatment. With normalization, consider an alternative agent.
Rifampin
Same as above
Same as above
TB Treatment
Check ALT, bilirubin, platelets, creatinine, and hepatitis panel for all patients at baseline. If hepatic risk factors are present, check ALT and bilirubin monthly.
Isoniazid
If ALT is >5× ULN (or >3× ULN with 
hepatitis symptoms)c
Obtain history of alcohol consumption and concomitant drug use.
In most instances, discontinue H, Z, R, and other hepatotoxic drugs. Consider alternative agents. Obtain 
viral hepatitis serologies.
Rechallenge: With normalization of liver enzymes, R and H may be sequentially reintroduced. With no 
recurrence of hepatotoxicity, Z is not resumed in many cases. Alternative rechallenge protocols have 
been used.
Rifampin
If primary elevation is in bilirubin and 
alkaline phosphatase, most likely due 
to rifampin
Discontinue R if total bilirubin reaches jaundice levels (usually >2× ULN).
May try to reintroduce; if not tolerated, may substitute Q.
Ethambutol
Decrease in visual acuity or color 
vision on monthly screening
Discontinue ethambutol and repeat ocular examination. Peripheral neuropathy may be a precursor of 
ocular toxicity; if it occurs, consider repeat ocular examination.
Pyrazinamide
If ALT is >5× ULN (or >3× ULN with 
symptoms)c
Same as for H.
Fluoroquinolone, 
bedaquiline, 
delamanid
QTc prolongation is a concern and 
should be monitored, especially if drugs 
are used in combination
Asymptomatic QTc prolongation should prompt consideration of stopping known QT-prolonging drugs 
and/or close monitoring, depending on the clinical situation and degree of prolongation. Symptomatic 
QTc prolongation (e.g., palpitations or arrhythmias) should prompt discontinuation of drugs.
Linezolid
Visual impairment; monitor for 
peripheral neuropathy and bone 
marrow suppression including anemia, 
thrombocytopenia, and leukopenia
Discontinue linezolid if visual toxicity develops. Rechallenge after complete resolution, especially with 
a lower dose, is an option. Stop if peripheral neuropathy or bone marrow suppression develops.
aAll regimens require monthly clinical monitoring. bHepatic risk factors: chronic alcohol use, viral hepatitis, preexisting liver disease, pregnancy or ≤3 months postpartum, 
hepatotoxic medications. cRelevant manifestations include nausea, vomiting, abdominal pain, jaundice, or unexplained fatigue.
Abbreviations: ALT, alanine aminotransferase; H, isoniazid; LTBI, latent tuberculosis infection; Q, fluoroquinolone; QTc, corrected QT interval; R, rifampin; ULN, upper limit of 
normal; Z, pyrazinamide.
Sources: JJ Saukkonen et al: An official ATS statement: Hepatotoxicity of antituberculosis therapy. Am J Respir Crit Care Med 174:935, 2006; American Thoracic Society/
Centers for Disease Control and Prevention/Infectious Diseases Society of America: Treatment of tuberculosis. Am J Respir Crit Care Med 167:603, 2003; WHO consolidated 
guidelines on drug-resistant tuberculosis treatment. Geneva: World Health Organization; 2019. License: CC BY-NC-SA 3.0 IGO.

drugs and with higher rates of treatment failure or relapse; therefore, 
intermittent twice-weekly therapy for TB in HIV-co-infected individu­
als is not recommended.
Adherence to medications is critical in achieving a cure with anti­
mycobacterial therapy. In addition to DOT by trained staff, either in 
the clinic or at home, case management interventions such as patient 
education/counseling, field/home visits, and patient reminders are also 
recommended to improve treatment adherence. Use of mobile health 
technologies, including video DOT, text messaging, and next-generation 
electronic pillboxes, shows promise in promoting TB adherence. In 
drug-susceptible TB, monthly dispensing of TB medications is also 
advised for all patients to allow essential clinical monitoring for hepa­
totoxicity due to these medications. Clinical monitoring includes at 
least monthly assessment for symptoms (nausea, vomiting, abdominal 
discomfort, and unexplained fatigue) and signs (jaundice, dark urine, 
light stools, diffuse pruritus) of hepatotoxicity, although the latter 
represent comparatively late manifestations (Table 186-3). The pres­
ence of such symptoms and signs mandates provisional discontinua­
tion of potentially hepatotoxic agents; discontinuation at the onset of 
hepatitis symptoms reduces the risk of progression to fatal hepatitis. 
Although biochemical monitoring is not routinely recommended, 
baseline assessment of liver function is recommended in adults includ­
ing testing of at least serum alanine aminotransferase (ALT) and total 
bilirubin levels (Table 186-3). (See Chap. 183 for further details.) For 
patients with active TB, monthly mycobacterial cultures of sputum are 
recommended until it is certain that the organisms have been cleared 
and the patient has responded to therapy or until no sputum is avail­
able for culture.
If significant clinical improvement does not occur or the patient’s 
condition deteriorates over the course of therapy, possibilities include

treatment failure due to incomplete adherence, poor medication 
absorption, or the development of resistance. For patients co-infected 
with HIV and M. tuberculosis, IRIS, which is a diagnosis of exclusion, 
should also be a consideration. Drug susceptibility testing should be 
repeated at this point. If resistance is documented or strongly sus­
pected, at least two efficacious drugs to which the isolate is susceptible 
or which the patient has not already taken should be added to the 
therapeutic regimen.
Multidrug-resistant tuberculosis (MDR-TB) is defined as disease 
caused by a strain of M. tuberculosis that is resistant to both isoniazid 
and rifampin—the most efficacious of the first-line TB drugs. The risk 
of MDR-TB is elevated in patients presenting from geographic areas in 
which ≥5% of incident cases are MDR-TB and in patients previously 
treated for TB. Treatment regimens for MDR-TB are rapidly evolving, 
and in 2019, the WHO issued a new classification of second-line agents 
to treat drug-resistant disease (Table 183-4). New 2022 WHO recom­
mendations emphasize an all-oral bedaquiline-containing regimen 
with the goal to limit treatment duration to 6 months compared to 
conventional durations of 9 months or longer (Table 186-4).
Results from several recent large clinical trials have formed the basis of 
these recommendations. The “Bangladesh regimen” was the first shortcourse MDR-TB regimen systematically studied in the STREAM-1 
trial and was able to reduce treatment duration to 9−12 months with 
favorable outcomes in up to 90% of patients. It consists of a seven-drug 
intensive phase (kanamycin, prothionamide, isoniazid, fluoroquino­
lone, ethambutol, pyrazinamide, and clofazimine) and a four-drug 
continuation phase (fluoroquinolone, ethambutol, pyrazinamide, and 
clofazimine). In 2018, a large meta-analysis, which pooled individual 
data from >12,000 patients enrolled in 50 trials, assessed the role of 
individual drugs to treat MDR-TB. This analysis showed an association 
of significantly better treatment outcomes with the use of linezolid, 
bedaquiline, clofazimine, carbapenems, and later generation fluoro­
quinolones and worse outcomes with kanamycin and capreomycin in 
these patients. As a result of this analysis, oral drug combinations are 
now prioritized, while several traditional second-line drugs, including 
kanamycin and capreomycin, are no longer recommended.
The shift toward all-oral regimens of shortened duration has been 
made possible by the introduction of novel drugs, most prominently 
bedaquiline and pretomanid, as well as the repurposing of existing 
agents for MDR-TB treatment (e.g., linezolid, clofazimine). A further 
TABLE 186-4  Simplified Approach to Treatment of Drug-Resistant Tuberculosis (TB) in Adultsa
CULTURE RESULTS
INTENSIVE PHASE
CONTINUATION PHASE
EXTENSION OF TOTAL TREATMENT
Resistant to H
Lfx RZEb for 6 months
…
Prolonged culture conversion and/or evidence 
of cavitation on chest radiography.
Resistant to HR (MDR)c
 
Bdq, Pa, Lz, Mfx for 6 months (may drop 
Mfx if documented Q resistance)
BPaLM Regimend
WHO short-course regimen 
(9-month all-oral regimen)e
Bdq plus Lfx or Mfx, Eto, E, Z, Hh, Cfz for 
4–6 months
At least four effective second-line 
agents, including all three group A and 
at least one group B; add group C if 
intolerant to A or B drugs for 5–7 months
WHO extended regimenf
aDrug-resistant TB treatment regimens should be constructed and care provided in close consultation with experienced drug-resistant TB clinicians. Surgical management 
should also be considered in appropriate cases. bProlonged pyrazinamide duration may be associated with increased risk of liver toxicity. cMonoresistance to R is rare 
and should be treated as MDR. The BPaLM regimen is now the preferred MDR treatment regimen for patients without significant prior exposure to Bdq, Dlm, Pa, or Lz. 
eThe WHO short-course regimen is recommended for patients not qualifying for BPaLM regimen (availability, medical comorbidities, drug resistance, prior exposure to Pa 
or Lz) with no prior exposure to second-line drugs and documented fluoroquinolone susceptibility only. Patients with treatment intolerance to antimycobacterial agents, 
disseminated TB, or pregnancy should be excluded from short-course regimens. fPatients who do not qualify for WHO short-course regimens should be treated using 
extended MDR-TB treatment regimens. The construction of extended regimens is guided by the requirement for selection of effective antimycobacterial agents, the need to 
combine sufficient medicines to maximize relapse-free survival, and the need to minimize toxicity.
Abbreviations: Bdq, bedaquiline; Cfz, clofazimine; E, ethambutol; Eto, ethionamide; H, isoniazid; Hh, high-dose isoniazid; Lfx, levofloxacin; Pa, Pretomanid; Dlm, Delamanid; 

Lz, Linezolid; MDR, multidrug resistant; Mfx, moxifloxacin; Pa, pretomanid; Q, fluoroquinolone; R, rifampin; WHO, World Health Organization; Z, pyrazinamide.
Sources: Official American Thoracic Society/Centers for Disease Control and Prevention/Infectious Diseases Society of America: Clinical practice guidelines: Treatment 
of drug-resistant tuberculosis. Am J Respir Crit Care Med 200:e93, 2019; World Health Organization consolidated guidelines on drug-resistant tuberculosis treatment. WHO 
2022.

step toward a shortened all-oral regimen was the Nix-TB study, which 
showed that a 6-month regimen of bedaquiline, pretomanid, and 
linezolid (BPaL regimen) for treatment of highly drug-resistant TB 
was associated with favorable outcomes (absence of clinical or bac­
teriologic treatment failure or relapse within 6 months of treatment 
completion) in 89% of patients. While a major breakthrough, caution 
has been raised regarding the higher rate of side effects, mostly due to 
linezolid, and lack of a control arm. The TB PRACTECAL trial was an 
open-label, multicenter, randomized, controlled, noninferiority trial 
that evaluated the safety and efficacy of a 24-week regimen of bedaqui­
line, pretomanid, linezolid, and moxifloxacin (BPaLM) compared to a 
9- to 20-month standard-care regimen for the treatment of rifampicinresistant TB. In this study, the 6-month BPaLM regimen was found 
to be noninferior in both the intention-to-treat and per-protocol 
analyses, with a lower percentage of serious adverse events compared 
to the standard-care regimen. High cost, limited access to these new 
drugs, and the threat of baseline and emergent resistance, especially to 
bedaquiline, are barriers that need to be addressed to facilitate global 
adaptation of these new regimens.

■
■FIRST-LINE ANTITUBERCULOSIS DRUGS
The following discussion of individual anti-TB agents focuses on treat­
ment of TB in adults, unless otherwise noted. Several agents are being 
actively investigated during the current remarkable period of drug 
development for TB treatment.
Isoniazid 
Isoniazid is a critical drug for treatment of both TB dis­
ease and LTBI. Isoniazid has excellent bactericidal activity against both 
intracellular and extracellular, actively dividing M. tuberculosis. This 
drug is bacteriostatic against slowly dividing organisms. In treatment 
of LTBI, isoniazid is generally well tolerated, has well-established effi­
cacy, and is inexpensive. In this setting, the drug is taken daily, which 
is the preferred dosing schedule, or intermittently (i.e., twice weekly) 
using DOT for 6 months, which has been found to be equivalent to the 
traditional 9 months in most settings. A weekly isoniazid and rifapen­
tine regimen, administered over 3 months under DOT, has been shown to 
be noninferior to daily isoniazid given for 9 months and had a higher 
treatment completion rate than the single-drug regimen. More recent 
evidence also suggests that completion rates of a self-administered 
3-month regimen of weekly isoniazid and rifapentine are noninferior 
CHAPTER 186
Antimycobacterial Agents
 
 
Failed culture conversion at month 4–6, 
delayed clinical response. Treatment 
interruption of >7 days is made up by adding on 
to the total treatment duration.
Lfx or Mfx, Cfz, Z, E for 5 months
At least 4 drugs for a total of 

18–20 months or for 15–17 months after 
culture conversion

to those seen with DOT in the United States. It is expected that a 
1-month daily regimen in combination with rifapentine will be added 
to new WHO guidelines.

For treatment of TB disease, isoniazid is used in combination with 
other agents to ensure killing of both actively dividing M. tuberculosis 
and slowly growing “persister” mycobacteria. Unless the organism is 
resistant, the standard regimen includes isoniazid, rifampin, ethambu­
tol, and pyrazinamide (Table 186-2). Isoniazid is often given together 
with 25–50 mg of pyridoxine daily to prevent drug-related peripheral 
neuropathy.
MECHANISM OF ACTION  Isoniazid is a prodrug activated by the 
mycobacterial KatG catalase-peroxidase; isoniazid is coupled with 
reduced nicotinamide adenine dinucleotide (NADH). The resulting 
isonicotinic acyl–NADH complex blocks the mycobacterial ketoenoyl­
reductase known as InhA through binding to its substrate and inhibit­
ing fatty acid synthase and ultimately mycolic acid synthesis. Mycolic 
acids are essential components of the mycobacterial cell wall. KatG 
activation of isoniazid also results in the release of free radicals that 
have antimycobacterial activity, including nitric oxide.
The minimal inhibitory concentrations (MICs) of isoniazid for 
wild-type (untreated) susceptible strains are <0.1 μg/mL for M. tuber­
culosis and 0.5–2 μg/mL for M. kansasii.
PHARMACOLOGY  Isoniazid is the hydrazide of isonicotinic acid, 
a small, water-soluble molecule. The usual adult oral daily dose of 

300 mg results in peak serum levels of 3–5 μg/mL within 30 min to 2 h 
after ingestion—well in excess of the MICs for most susceptible strains 
of M. tuberculosis. Both oral and IM preparations of isoniazid reach 
effective levels in the body, although antacids and high-carbohydrate 
meals may interfere with oral absorption. Isoniazid diffuses well 
throughout the body, reaching therapeutic concentrations in body 
cavities and fluids, with concentrations in cerebrospinal fluid (CSF) 
comparable to those in serum.
PART 5
Infectious Diseases
Isoniazid is metabolized in the liver via acetylation by N-

acetyltransferase 2 (NAT2) and hydrolysis. Both fast- and slow-acetylation 
phenotypes occur; patients who are “fast acetylators” may have lower 
serum levels of isoniazid, whereas “slow acetylators” may have higher 
levels and experience more toxicity. Satisfactory isoniazid levels are 
attained in the majority of homozygous fast NAT2 acetylators given a 
dose of 6 mg/kg and in the majority of homozygous slow acetylators 
given only 3 mg/kg. Genotyping is increasingly being used to charac­
terize isoniazid-related pharmacogenomic responses.
Isoniazid’s interactions with other drugs are due primarily to its 
inhibition of the cytochrome P450 system. Among the drugs with 
significant isoniazid interactions are warfarin, carbamazepine, ben­
zodiazepines, acetaminophen, clopidogrel, maraviroc, dronedarone, 
salmeterol, tamoxifen, eplerenone, and phenytoin.
DOSING  The recommended daily dose of isoniazid for the treatment 
of TB is 5 mg/kg for adults and 10 mg/kg for children (U.S. guidelines 
recommend 10−15 mg), with a maximal daily dose of 300 mg for both. 
For intermittent therapy in adults (usually twice per week), the dose 
is 15 mg/kg, with a maximal daily dose of 900 mg. Isoniazid does not 
require dosage adjustment in patients with renal disease. When the 
12-dose, 3-month weekly LTBI regimen is used, the dose of isoniazid is 
15 mg/kg, with a maximal dose of 900 mg, and the drug is co-administered 
with rifapentine. The novel 1-month regimen uses isoniazid 300 mg in 
conjunction with rifapentine for people aged >13 years without weight 
adjustment.
RESISTANCE  Although isoniazid, along with rifampin, is the mainstay 
of TB treatment regimens, ~7% of clinical M. tuberculosis isolates in 
the United States are resistant. Rates of primary isoniazid resistance 
among untreated patients are significantly higher in many populations 
born outside the United States. Five separate pathways for isoniazid 
resistance have been elucidated. Most strains have amino acid changes 
in either the catalase-peroxidase gene (katG) or the mycobacterial 
ketoenoylreductase gene (inhA). Less frequently, alterations in kasA, 
the gene for an enzyme involved in mycolic acid elongation, and 
loss of NADH dehydrogenase 2 activity confer isoniazid resistance. 

In 20–30% of isoniazid-resistant M. tuberculosis isolates, increased 
expression of efflux pump genes, such as efpA, mmpL7, mmr, p55, 
and the Tap-like gene Rv1258c, has been implicated as the underlying 
mechanism of resistance.
ADVERSE EFFECTS  Although isoniazid is generally well tolerated, 
drug-induced liver injury and peripheral neuropathy are significant 
adverse effects associated with this agent. Isoniazid may cause asymp­
tomatic transient elevation of aminotransferase levels (often termed 
hepatic adaptation) in up to 20% of recipients. Other adverse reactions 
include rash (2%), fever (1.2%), anemia, acne, arthritic symptoms, a 
systemic lupus erythematosus–like syndrome, optic atrophy, seizures, 
and psychiatric symptoms. Symptomatic hepatitis occurs in <0.1% of 
persons treated with isoniazid alone for LTBI, and fulminant hepatitis 
with hepatic failure occurs in <0.01%. Isoniazid-associated hepatitis is 
idiosyncratic, but its incidence increases with age, with daily alcohol 
consumption, and in women who are within 3 months postpartum.
In patients who have liver disorders or HIV infection, who are preg­
nant or in the 3-month postpartum period, who have a history of liver 
disease (e.g., hepatitis B or C, alcoholic hepatitis, or cirrhosis), who 
use alcohol regularly, who have multiple medical problems, or who 
have other risk factors for chronic liver disease, the risks and benefits 
of isoniazid treatment for LTBI should be weighed. If treatment is 
undertaken, these patients should have serum concentrations of ALT 
determined at baseline. Routine baseline hepatic ALT testing based 
solely on an age of >35 years is optional and depends on individual 
concerns. Monthly biochemical monitoring during isoniazid treat­
ment is indicated for patients whose baseline liver function tests yield 
abnormal results and for persons at risk for hepatic disease, including 
the groups just mentioned. Guidelines recommend that isoniazid be 
discontinued in the presence of hepatitis symptoms or jaundice and 
an ALT or AST level three times the upper limit of normal or in the 
absence of symptoms with an ALT or AST level five times the upper 
limit of normal (Table 186-3).
Peripheral neuropathy associated with isoniazid occurs in up to 2% 
of patients given 5 mg/kg. Isoniazid appears to interfere with pyridox­
ine (vitamin B6) metabolism. The risk of isoniazid-related neurotoxic­
ity is greatest for patients with preexisting disorders that also pose 
a risk of neuropathy, such as HIV infection; for those with diabetes 
mellitus, alcohol abuse, or malnutrition; and for those simultaneously 
receiving other potentially neuropathic medications, such as stavudine. 
These patients should be given prophylactic pyridoxine (25–50 mg/d).
Rifampin 
Rifampin is a semisynthetic derivative of Amycolatopsis 
rifamycinica (formerly known as Streptomyces mediterranei). The most 
active antimycobacterial agent available, rifampin is the keystone of 
first-line treatment for TB. Introduced in 1968, this drug eventually 
permitted dramatic shortening of the TB treatment course. Rifampin 
has both sterilizing and bactericidal activity against dividing and 
nondividing M. tuberculosis. The drug is also active against an array 
of other organisms, including some gram-positive and gram-negative 
bacteria, Legionella, M. kansasii, and Mycobacterium marinum.
MECHANISM OF ACTION  Rifampin exerts both intracellular and 
extracellular bactericidal activities. Like other rifamycins, rifampin 
specifically binds to and inhibits mycobacterial DNA-dependent RNA 
polymerase, blocking RNA synthesis. Susceptible strains of M. tubercu­
losis as well as M. kansasii and M. marinum are inhibited by rifampin 
concentrations of 1 μg/mL.
PHARMACOLOGY  Rifampin is a fat-soluble, complex macrocyclic molecule 
readily absorbed after oral administration. Serum levels of 10–20 μg/mL 
are achieved 2.5 h after the usual adult oral dose of 10 mg/kg (given 
without food). Rifampin has a half-life of 1.5–5 h. The drug distributes 
well throughout most body tissues, including CSF. Rifampin turns body 
fluids such as urine, saliva, sputum, and tears a reddish-orange color—an 
effect that offers a simple means of assessing patients’ adherence to this 
medication. Rifampin is excreted primarily through the bile and enters 
the enterohepatic circulation; <30% of a dose is renally excreted.
As a potent inducer of the hepatic cytochrome P450 system, 
rifampin can decrease the half-life of some drugs, such as digoxin,

warfarin, phenytoin, prednisone, cyclosporine, methadone, oral con­
traceptives, clarithromycin, azole antifungal agents, quinidine, anti­
retroviral protease inhibitors, and nonnucleoside reverse transcriptase 
inhibitors. The Centers for Disease Control and Prevention (CDC) 
has issued guidelines for the management of drug interactions during 
treatment of HIV and M. tuberculosis co-infection (www.cdc.gov/tb/).
DOSING  The daily dosage of rifampin is 10 mg/kg for adults and 
10–20 mg/kg for children, with a maximum of 600 mg/d for both. 
The drug is given once daily, twice weekly, or three times weekly. No 
adjustments of dose or frequency are necessary in patients with renal 
insufficiency.
RESISTANCE  Resistance to rifampin in M. tuberculosis, M. leprae, and 
other organisms is the consequence of spontaneous, mostly missense 
point mutations in a core region of the bacterial gene coding for the β 
subunit of RNA polymerase (rpoB). RNA polymerase altered in this 
manner is no longer subject to inhibition by rifampin. Most rapidly and 
slowly growing NTM harbor intrinsic resistance to rifampin, for which 
the mechanism has yet to be determined.
ADVERSE EFFECTS  Adverse events associated with rifampin are 
infrequent and generally mild. Hepatotoxicity due to rifampin alone is 
uncommon in the absence of preexisting liver disease and often con­
sists of isolated hyperbilirubinemia rather than aminotransferase eleva­
tion. Other adverse reactions include rash, pruritus, gastrointestinal 
symptoms, and pancytopenia. Rarely, a hypersensitivity reaction may 
occur with intermittent therapy, manifesting as fever, chills, malaise, 
rash, and—in some instances—renal and hepatic failure.
Pyrazinamide 
A nicotinamide analogue, pyrazinamide is an 
important bactericidal drug used in the initial phase of TB treatment. 
Its administration for the first 2 months of therapy with rifampin and 
isoniazid allows treatment duration to be shortened from 9 to 6 months 
and decreases rates of relapse.
MECHANISM OF ACTION  Pyrazinamide’s antimycobacterial activity is 
essentially limited to M. tuberculosis. The drug is more active against 
slowly replicating organisms than against actively replicating organ­
isms. Pyrazinamide is a prodrug that is converted by the mycobacte­
rial pyrimidase to the active form, pyrazinoic acid (POA). This agent 
is active only in acidic environments (pH <6.0), as are found within 
phagocytes or granulomas. The exact mechanism of action of POA 
is unclear, but fatty acid synthetase I may be the primary target in M. 
tuberculosis. Susceptible strains of M. tuberculosis are inhibited by pyra­
zinamide concentrations of 16–50 μg/mL at pH 5.5.
PHARMACOLOGY AND DOSING  Pyrazinamide is well absorbed after 
oral administration, with peak serum concentrations of 20–60 μg/mL 
at 1–2 h after ingestion of the recommended adult daily dose of 15–30 
mg/kg (maximum, 2 g/d). It distributes well to various body compart­
ments, including CSF, and is an important component of treatment for 
tuberculous meningitis. The serum half-life of the drug is 9–11 h with 
normal renal and hepatic function. Pyrazinamide is metabolized in the 
liver to POA, 5-hydroxypyrazinamide, and 5-hydroxy-POA. A high 
proportion of pyrazinamide and its metabolites (~70%) is excreted in 
the urine. The dosage must be adjusted according to the level of renal 
function in patients with reduced creatinine clearance.
ADVERSE EFFECTS  At the higher dosages used previously, hepatotox­
icity was seen in as many as 15% of patients treated with pyrazinamide. 
However, at the currently recommended dosages, hepatotoxicity now 
occurs less commonly when this drug is administered with isoniazid 
and rifampin during the treatment of TB. Older age, active liver dis­
ease, HIV infection, and low albumin levels may increase the risk of 
hepatotoxicity. The use of pyrazinamide with rifampin for the treat­
ment of LTBI is no longer recommended because of unacceptable rates 
of hepatotoxicity and death in this setting. Hyperuricemia is a common 
adverse effect of pyrazinamide therapy that usually can be managed 
conservatively. Clinical gout is rare.
Although pyrazinamide is recommended by international TB orga­
nizations for routine use in pregnancy, it is not recommended in the 
United States because of inadequate teratogenicity data.

RESISTANCE  The basis of pyrazinamide resistance in M. tubercu­
losis is a mutation in the pncA gene coding for pyrazinamidase, the 
enzyme that converts the prodrug to active POA. Resistance to pyra­
zinamide is associated with loss of pyrazinamidase activity, which pre­
vents conversion of pyrazinamide to POA. Of pyrazinamide-resistant 

M. tuberculosis isolates, 72–98% have mutations in pncA. Conventional 
methods of testing for susceptibility to pyrazinamide may produce 
both false-negative and false-positive results because the high-acidity 
environment required for the drug’s activation also inhibits the growth 
of M. tuberculosis. There is some controversy as to the clinical signifi­
cance of in vitro pyrazinamide resistance.

Ethambutol 
Ethambutol is a bacteriostatic antimycobacterial agent 
first synthesized in 1961. A component of the standard first-line regi­
men, ethambutol provides synergy with the other drugs in the regimen 
and is generally well tolerated. Susceptible species include M. tubercu­
losis, M. marinum, M. kansasii, and organisms of the Mycobacterium 
avium complex (MAC); however, among first-line drugs, ethambutol 
is the least potent against M. tuberculosis. This agent is also used in 
combination with other agents in the continuation phase of treatment 
when patients cannot tolerate isoniazid or rifampin or are infected with 
organisms resistant to either of the latter drugs.
MECHANISM OF ACTION  Ethambutol is bacteriostatic against 

M. tuberculosis. Its primary mechanism of action is the inhibition of 
the arabinosyltransferases involved in cell wall synthesis, which prob­
ably inhibits the formation of arabinogalactan and lipoarabinomannan. 
The MIC of ethambutol for susceptible strains of M. tuberculosis is 
0.5–2 μg/mL.
CHAPTER 186
PHARMACOLOGY AND DOSING  From a single dose of ethambutol, 
75–80% is absorbed within 2–4 h of administration. Serum levels peak 
at 2–4 μg/mL after the standard adult daily dose of 15 mg/kg. Etham­
butol is well distributed throughout the body except in the CSF; a dos­
age of 25 mg/kg is necessary for attainment of a CSF level half of that 
in serum. For intermittent therapy, the dosage is 25–35 mg/kg thrice 
weekly. To prevent toxicity, the dosage must be lowered and the fre­
quency of administration reduced for patients with renal insufficiency.
Antimycobacterial Agents
ADVERSE EFFECTS  Ethambutol is usually well tolerated and has no 
significant interactions with other drugs. Optic neuritis, the most 
serious adverse effect reported, typically presents as reduced visual 
acuity, central scotoma, and loss of the ability to see green (or, less 
commonly, red). The cause of this neuritis is unknown, but it may be 
due to an effect of ethambutol on the amacrine and bipolar cells of 
the retina. Symptoms typically develop several months after initiation 
of therapy, but ocular toxicity soon after initiation of ethambutol has 
been described. The risk of ocular toxicity is dose dependent, with 
occurrence in 1–5% of patients, and can be increased by renal insuf­
ficiency. The routine use of ethambutol in younger children is not 
recommended because monitoring for visual complications can be 
difficult. If drug-resistant TB is suspected, ethambutol can be used for 
treatment of children.
All patients starting therapy with ethambutol should have a baseline 
test for visual acuity, visual fields, and color vision and should undergo 
an examination of the optic fundus. Visual acuity and color vision 
should be monitored monthly or less often as needed. Cessation of 
ethambutol in response to early symptoms of ocular toxicity usually 
results in reversal of the deficit within several months. Recovery of all 
visual function may take up to 1 year. In the elderly and in patients 
whose symptoms are not recognized early, deficits may be permanent. 
Some experts think that supplementation with hydroxycobalamin 
(vitamin B12) is beneficial for patients with ethambutol-related ocular 
toxicity. Other adverse effects of ethambutol are rare. Peripheral sen­
sory neuropathy occurs in rare instances.
RESISTANCE  Ethambutol resistance in M. tuberculosis and NTM is 
associated primarily with missense mutations in the embB gene that 
encodes for arabinosyltransferase. Mutations have been found in resis­
tant strains at codon 306 in 50–70% of cases. Mutations at embB306 
can cause significantly increased MICs of ethambutol, resulting in 
clinical resistance.

■
■OTHER RIFAMYCIN DRUGS

Rifabutin 
Rifabutin, a semisynthetic derivative of rifamycin S, 
inhibits mycobacterial DNA-dependent RNA polymerase. Rifabutin 
is recommended in place of rifampin for the treatment of TB in 
HIV-co-infected individuals who are taking protease inhibitors or 
nonnucleoside reverse transcriptase inhibitors, particularly nevirap­
ine. A study in India showed better TB treatment outcomes in HIVco-infected patients given daily rifabutin plus atazanavir/ritonavir 
than in those given thrice-weekly rifabutin plus atazanavir/ritonavir. 
Rifabutin’s effect on hepatic enzyme induction is less pronounced than 
that of rifampin. Protease inhibitors may cause significant increases in 
rifabutin levels through inhibition of hepatic metabolism. Rifabutin is 
more active in vitro than rifampin against MAC organisms and other 
NTM, but its clinical superiority has not been established.
PHARMACOLOGY  Like rifampin, rifabutin is lipophilic and is absorbed 
rapidly after oral administration, reaching peak serum levels 2–4 h 
after ingestion. Rifabutin distributes best to tissues, reaching levels 
5–10 times higher than those in plasma. Unlike rifampin, rifabutin and 
its metabolites are partially cleared by the hepatic microsomal system. 
Rifabutin’s slow clearance results in a mean serum half-life of 45 h—
much longer than the 3- to 5-h half-life of rifampin. Clarithromycin 
(but not azithromycin) and fluconazole appear to increase rifabutin 
levels by inhibiting hepatic metabolism.
ADVERSE EFFECTS  The most common adverse effects of rifabutin 
treatment are gastrointestinal; other reactions include rash, headache, 
asthenia, chest pain, myalgia, and insomnia. Less common adverse 
reactions include fever, chills, a flulike syndrome, anterior uveitis, 
hepatitis, Clostridium difficile–associated diarrhea, a diffuse polymy­
algia syndrome, and yellow skin discoloration (“pseudo-jaundice”). 
Laboratory abnormalities include neutropenia, leukopenia, thrombo­
cytopenia, and increased levels of liver enzymes. Rifabutin appears to 
be better tolerated by the majority (72%) of adult TB patients who have 
developed rifampin-related adverse effects. Female patients, those coinfected with hepatitis B or hepatitis C, and those with rifampin-related 
arthralgias, dermatologic reactions, and cholestasis are more likely to 
develop mild to severe rifabutin-related adverse effects.
PART 5
Infectious Diseases
RESISTANCE  Similar to rifampin resistance, rifabutin resistance is 
mediated by mutations in rpoB.
Rifapentine 
Rifapentine is a semisynthetic cyclopentyl rifamycin, 
sharing a mechanism of action with rifampin. Rifapentine is lipophilic 
and has a prolonged half-life that permits weekly or twice-weekly 
dosing. Therefore, rifapentine is the subject of intensive clinical inves­
tigation aimed at determining optimal dosing and frequency of admin­
istration. Currently, it is an alternative to rifampin in the continuation 
phase of treatment for noncavitary drug-susceptible pulmonary TB 
in HIV-seronegative patients who have negative sputum smears at 
completion of the initial phase of treatment. When administered in 
these specific circumstances, rifapentine (10 mg/kg, up to 600 mg) is 
given once weekly with isoniazid. Because of higher rates of relapse, 
this regimen is not recommended for patients with TB disease and HIV 
co-infection; moreover, it has not been approved for children <12 years 
of age. In a phase 2 study, substituting daily rifapentine for rifampin 
yielded higher rates of sputum sterilization after 2 months of intensive 
treatment. Higher doses of rifapentine (20 mg/kg vs 10 mg/kg) had 
better results and were safe and well tolerated. Regimens containing 
high doses of rifapentine are being evaluated to see whether they can 
shorten the TB treatment course to <6 months.
PHARMACOLOGY  Rifapentine’s absorption is improved when the 
drug is taken with food. After oral administration, rifapentine reaches 
peak serum concentrations in 5–6 h and achieves a steady state in 

10 days. The half-life of rifapentine and its active metabolite, 25-desacetyl 
rifapentine, is ~13 h. The administered dose is excreted via the liver 
(70%).
ADVERSE EFFECTS  The adverse effects profile of rifapentine is similar 
to that of other rifamycins. Rifapentine is teratogenic in animal models 
and is relatively contraindicated in pregnancy.

RESISTANCE  Rifapentine resistance is mediated by mutations in rpoB. 
Mutations that cause resistance to rifampin also cause resistance to 
rifapentine.
■
■SECOND-LINE ANTITUBERCULOSIS DRUGS
Second-line anti-TB agents are indicated for treatment of drug-resistant 
TB, for patients who are intolerant or allergic to first-line agents, and 
when first-line supplemental agents are unavailable. According to their 
usability, they are divided into three WHO groups.
Group A 
• 
FLUOROQUINOLONES  Fluoroquinolones inhibit 
mycobacterial DNA gyrase and topoisomerase IV, preventing cell repli­
cation and protein synthesis, and are bactericidal. Given their excellent 
activity, they have been investigated for their potential to shorten the 
course of treatment for drug-susceptible TB from 6 to 4 months. In 
contrast to prior trials, a recent large, open-label, randomized controlled 
trial (TBTC Study 31) yielded promising results for shortening of TB 
treatment. Patients with drug-susceptible TB disease were randomized 
to receive either a standard 6-month TB regimen or a 4-month regimen 
containing rifapentine (8 weeks of once-daily rifapentine, isoniazid, 
pyrazinamide, and ethambutol followed by 9 weeks of once-daily rifa­
pentine and isoniazid) or a 4-month regimen containing rifapentine 
and moxifloxacin (8 weeks of once-daily rifapentine, isoniazid, pyrazin­
amide, and moxifloxacin followed by 9 weeks of once-daily rifapentine, 
isoniazid, and moxifloxacin). The trial demonstrated that a 4-month 
regimen using daily rifapentine and moxifloxacin (but not the rifapen­
tine-only regimen) was noninferior to the standard 6-month TB treat­
ment regimen using an end point of TB-free survival 12 months after 
randomization. Combining once-daily rifapentine with moxifloxacin 
allows for synergistic action on sputum conversion in a compliancefriendly once-daily option. Current recommendations continue to be 
for a standard 6-month regimen, although it is anticipated that these 
results will inform future guidelines. Gatifloxacin has fallen out of favor 
because of significant dysglycemia. Ciprofloxacin and ofloxacin are no 
longer recommended for the treatment of TB because of poor efficacy. 
Despite documented resistance to early-generation fluoroquinolones 
(e.g., ofloxacin and ciprofloxacin), use of a later-generation fluoroquino­
lone in patients with drug-resistant TB has been associated with favor­
able outcomes. Fluoroquinolones are also considered safe alternatives for 
patients who develop treatment-limiting adverse effects from first-line 
agents. Levofloxacin and moxifloxacin have both been used effectively 
in the treatment of MDR-TB. The optimal dose of levofloxacin for this 
indication is being actively studied, but doses of at least 750 mg are 
commonly used. High-dose moxifloxacin (800 mg) is recommended for 
standardized shorter MDR-TB regimens.
The fluoroquinolones are well absorbed orally, reach high serum 
levels, and distribute well into body tissues and fluids. Their absorp­
tion is decreased by co-ingestion with products containing multivalent 
cations, such as antacids. Adverse effects are relatively infrequent 
(0.5–10% of patients) and include gastrointestinal intolerance, rashes, 
dizziness, and headache. Most studies of fluoroquinolone side effects 
have been based on relatively short-term administration for bacterial 
infections, but trials have now shown the relative safety and tolerability 
of fluoroquinolones administered for months during TB treatment in 
adults. Although the potential to prolong the QTc interval, leading to 
cardiac arrhythmias, has been a source of concern with fluoroquino­
lones, cessation of treatment due to this adverse effect is rare. Because 
the benefits may outweigh the risks in treatment of drug-resistant TB, 
there is increasing interest in the use of fluoroquinolones in children, 
which has traditionally been avoided because of the risks of tendon 
rupture and cartilage damage.
Multiple courses of empirical fluoroquinolone therapy for presumed 
community-acquired pneumonia are associated with delayed diagnosis 
of active pulmonary TB and increased fluoroquinolone resistance in 

M. tuberculosis. Mutations in the genes encoding for DNA gyrase (gyrA 
and gyrB) are implicated in the majority of cases—but not all cases—of 
clinical resistance to fluoroquinolones.
DIARYLQUINOLINES  Bedaquiline (TMC207 or R207910) is a dia­
rylquinoline with a novel mechanism of action: inhibition of the

mycobacterial ATP synthetase proton pump. Bedaquiline is bacteri­
cidal for M. tuberculosis. Resistance has been reported due to point 
mutations in the atpE gene encoding for subunit c of ATP synthetase. 
Clinical bedaquiline resistance has also been reported due to non­
target mutations in mmpR or Rv0678 (a negative repressor of the 
MmpS5–MmpL5 efflux pump) and PepQ (a cytoplasmic peptidase), 
both of which may cause cross-resistance to clofazimine. Bedaquiline 
is metabolized by the hepatic cytochrome CYP3A4. Rifampin lowers 
bedaquiline levels by 50%, and protease inhibitors also interact sig­
nificantly with this drug. Because efavirenz induces CYP3A4, there is 
concern about lower bedaquiline levels with co-administration. In a 
study of co-treatment with bedaquiline and efavirenz in healthy volun­
teers, bedaquiline levels were reduced by only 20%; however, in a study 
modeling chronic co-administration of these two drugs, the reduction 
in bedaquiline levels was estimated to be 50%, leading many national 
TB programs to avoid efavirenz co-administration with bedaquiline.
The oral bioavailability of bedaquiline appears to be excellent. The 
dosage is 400 mg/d for the first 2 weeks and then 200 mg thrice weekly 
typically for 6 months total. The elimination half-life is long (>14 days). 
A single dose of this drug can inhibit the growth of M. tuberculosis for 
up to 1 week through a combination of long plasma half-life, high-level 
tissue penetration, and long tissue half-life. Bedaquiline added to a 
background regimen improved the 2-month sputum culture–conversion 
rate in multicenter, randomized, placebo-controlled trials, and these 
results led to approval by the U.S. Food and Drug Administration 
(FDA). However, the death rate in one trial was higher in the bedaqui­
line arm than in the control arm (11.4 vs 2.5%); the result was a “black 
box” warning from the FDA, which also included QT prolongation. 
Subsequent studies have not found an association with significant 
mortality. The CDC has made a provisional recommendation for the 
use of bedaquiline for 24 weeks in adults with laboratory-confirmed 
pulmonary MDR-TB when no other effective treatment regimen can 
be provided. Bedaquiline is an integral part of all shorter course, oral 
MDR treatment regimens endorsed by the WHO.
OXAZOLIDINONES  Linezolid is an oxazolidinone used primarily for the 
treatment of drug-resistant gram-positive bacterial infections. However, 
this drug is active in vitro against M. tuberculosis and NTM. Several case 
series have suggested that linezolid may help clear mycobacteria rela­
tively rapidly when included in a regimen for the treatment of complex 
cases of drug-resistant TB. Linezolid’s mechanism of action is disruption 
of protein synthesis by binding to the 50S bacterial ribosome. Linezolid 
has nearly 100% oral bioavailability, with good penetration into tis­
sues and fluids, including CSF. Clinical resistance to linezolid has been 
reported and is typically associated with mutations in the 23S rRNA 
and in two ribosomal proteins, L3 (rplC) and L4 (rplD). Adverse effects 
may include optic and peripheral neuropathy, pancytopenia, and lactic 
acidosis and are usually associated with higher doses. Linezolid is a weak 
monoamine oxidase inhibitor and can be associated with the serotonin 
syndrome when given concomitantly with serotonergic drugs (primarily 
antidepressants such as selective serotonin reuptake inhibitors). It has 
been shown that ~80% of patients with MDR-TB can be successfully 
treated with linezolid-containing, individualized anti-TB regimens based 
on drug sensitivity testing. Replacement of ethambutol with linezolid for 
2–4 weeks during the intensive phase of treatment of drug-susceptible 
TB is currently being evaluated for possible faster sputum conversion 
and a shorter treatment regimen. For MDR-TB treatment, linezolid is 
usually administered at a dose of 600 mg (or less in some cases) once 
daily, which appears to be effective. A single daily dose is associated with 
fewer adverse events than twice-a-day dosing.
Sutezolid, a modified version of oxazolidinones and protein syn­
thesis inhibitor, is found to have higher early bactericidal activity 
compared to linezolid and is currently undergoing phase 2A trials. It 
is currently FDA approved for complex skin infections and appears to 
have less frequent side effects compared to linezolid; the adverse effects 
profile of long-term exposure compared with that of linezolid needs 
further investigation.
Group B 
• 
CLOFAZIMINE  Clofazimine is a fat-soluble rimino­
phenazine dye used primarily in the treatment of leprosy worldwide. 

It is currently gaining popularity in the management of drug-resistant 
TB because of its low cost and its intracellular and extracellular activ­
ity. By increasing reactive oxidant species and causing membrane 
destabilization, clofazimine may promote killing of antibiotic-tolerant 

M. tuberculosis “persister” organisms. In addition to antimicrobial 
activity, the drug has other pharmacologic activities, such as antiinflammatory, pro-oxidative, and immunopharmacologic properties. 
Clofazimine has a half-life of ~70 days in humans, and average steadystate concentrations are achieved at ~1 month. Intake with fatty meals 
can improve its low and variable rates of absorption (45–62%). Com­
mon side effects include gastrointestinal intolerance and reversible 
orange to brownish discoloration of skin, bodily fluids, and secretions. 
Dose adjustment may be necessary in patients with severe hepatic 
impairment. Clofazimine was studied as part of a regimen developed in 
Bangladesh for potential shortening of the MDR-TB treatment course. 
A meta-analysis suggested that inclusion of clofazimine in a multidrug 
regimen for treatment of MDR-TB was associated with a favorable 
outcome. Newer analogues with improved pharmacokinetics and 
alternative formulations of clofazimine (liposomal, nanosuspension, 
inhalational) are being studied.

CYCLOSERINE  Cycloserine is an analogue of the amino acid d-alanine 
and prevents bacterial cell-wall synthesis. It inhibits the action of 
enzymes, including alanine racemase, that are involved in the produc­
tion of peptidoglycans. Cycloserine is active against a range of bacteria, 
including M. tuberculosis. Mechanisms of mycobacterial resistance 
are not well understood, but overexpression of alanine racemase can 
confer resistance in Mycobacterium smegmatis. Cycloserine is well 
absorbed after oral administration and is widely distributed through­
out body fluids, including CSF. The usual adult dosage is 250 mg two or 
three times per day. Serious potential side effects include seizures and 
psychosis (with suicide in some cases), peripheral neuropathy, head­
ache, somnolence, and allergic reactions. Drug levels are monitored 
to achieve optimal dosing and to reduce the risk of adverse effects, 
especially in patients with renal failure. Cycloserine should be adminis­
tered as DOT only with caution and with support from experienced TB 
physicians to patients with epilepsy, active alcohol abuse, severe renal 
insufficiency, or a history of depression or psychosis.
CHAPTER 186
Antimycobacterial Agents
Group C 
• 
NITROIMIDAZOLES  The prodrugs delamanid (OPC67683) and pretomanid (PA 824) are novel nitro-dihydro-imidaz­
ooxazole derivatives that are activated by M. tuberculosis–specific 
flavin-dependent nitroreductases and whose antimycobacterial activity 
is attributable to inhibition of mycolic acid biosynthesis. Delamanid 
was shown in a randomized, placebo-controlled, multinational clinical 
trial to significantly improve the culture conversion rate at 2 months. 
QT prolongation occurred significantly more often in delamanidtreated patients, but no clinically relevant events were reported. In a 
subsequent randomized phase 3 trial, there was no significant differ­
ence in 6-month sputum conversion between delamanid and placebo 
among patients with an optimized background regimen. Currently, it is 
part of several ongoing clinical trials including combination with beda­
quiline. It is recommended for use in children younger than 6 years 
with rifampicin-resistant TB. Usual adult dose is 100 mg twice daily.
Pretomanid, the second novel agent from this class, has shown 
promising results in the treatment of drug-resistant TB in combination 
with bedaquiline. A combination of pretomanid with moxifloxacin and 
pyrazinamide for treatment of drug-susceptible TB was found to have 
higher culture conversation rates at 8 weeks compared to HRZE; how­
ever, a subsequent phase 3 study raised concern for higher frequency of 
potentially fatal hepatotoxicity. It is currently being evaluated in several 
phase 3 clinical trials in various combinations, including with fluo­
roquinolones and pyrazinamide. Based on the previously mentioned 
results with the BPaL regimen (Nix-TB study), the FDA has granted 
approval for specific highly resistant TB cases. Adult treatment dose is 
200 mg administered daily.
AMOXICILLIN-CLAVULANATE AND CARBAPENEMS  β-Lactam agents 
are largely ineffective for the treatment of M. tuberculosis because 
of resistance conferred by a hydrolyzing class A β-lactamase, BlaC.

Carbapenems are poor substrates of BlaC, and clavulanic acid leads to 
irreversible inhibition. While the use of either amoxicillin-clavulanic 
acid or carbapenems alone for highly resistant forms of TB has 
been anecdotally reported with unclear results, the combination of 
meropenem and clavulanic acid turned out to be highly active in vitro. 
Recently, the combination was found to have effective early bacteri­
cidal activity, and in a large individual patient data meta-analysis, the 
combination was associated with positive outcomes. Nevertheless, the 
need to administer these carbapenems intravenously and the lack of 
information on the drugs’ long-term side effects have restricted their 
use to certain severe cases only. Recommended daily doses are either 
imipenem-cilastatin 1 g (each component) IV twice daily or merope­
nem 1 g IV three times daily, each in combination with clavulanic acid 
125 mg oral twice daily, which is only available in combination with 
amoxicillin.

AMINOGLYCOSIDES  Aminoglycosides have played a time-honed role 
in the treatment of mycobacterial infections. Amikacin and streptomy­
cin are aminoglycosides that exert mycobactericidal activity by bind­
ing to the 16S ribosomal subunit. The spectrum of antibiotic activity 
for amikacin and streptomycin includes M. tuberculosis, several NTM 
species, and aerobic gram-negative and gram-positive bacteria. Due to 
the need of intravenous or painful intramuscular injections and their 
serious side effect profile, the WHO recommends limiting their use 
with the increased availability of novel oral agents. Kanamycin and 
capreomycin, a cyclic polypeptide similar to aminoglycosides, are no 
longer recommended due to worse treatment outcomes and increased 
mortality. This recommendation is based on a large individual patientlevel meta-analysis of observational cohort studies and is likely due to 
increased toxicity seen with these agents. Streptomycin was the first 
antimycobacterial agent used for the treatment of TB. Derived from 
Streptomyces griseus, streptomycin is bactericidal against dividing 
M. tuberculosis organisms but has only low-level early bactericidal 
activity. In developing countries, it continues to be widely used due 
to its low cost. The usual daily dose of streptomycin (given IM either 
daily or 5 days per week) is 15 mg/kg for adults and 20–40 mg/kg 
for children, with a maximum of 1 g/d for both with dose reduction 
recommended for patients ≥60 years of age or with renal impairment. 
Central nervous system penetration is poor.
PART 5
Infectious Diseases
Amikacin resistance is less widespread, and streptomycin-resistant 
strains may still be susceptible. The usual daily adult dosage is 15–30 
mg/kg given IM or IV (maximal daily dose, 1 g). It is frequently used 
to treat severe NTM infections.
Mycobacterial resistance to aminoglycosides is due to mutations in 
the genes encoding the 16S ribosomal RNA gene (rrs). Adverse effects 
of both amikacin and streptomycin include ototoxicity (in up to 10% of 
recipients, with auditory dysfunction occurring more commonly than 
vestibulotoxicity), nephrotoxicity, and neurotoxicity.
ETHIONAMIDE  Ethionamide is a derivative of isonicotinic acid. Its 
mechanism of action is through inhibition of the inhA gene product 
enoyl–acyl carrier protein (acp) reductase, which is involved in mycolic 
acid synthesis. Ethionamide is bacteriostatic against metabolically 
active M. tuberculosis and some NTM. It is used in the treatment 
of drug-resistant TB, but its use is limited by severe gastrointestinal 
reactions (including abdominal pain, nausea, and vomiting) as well 
as significant central and peripheral neurologic side effects, revers­
ible hepatitis (in ~5% of recipients), hypersensitivity reactions, and 
hypothyroidism. Ethionamide should be taken with food to reduce 
gastrointestinal effects and with pyridoxine (50–100 mg/d) to limit 
neuropathic side effects.
PARA-AMINOSALICYLIC ACID  Para-aminosalicylic acid (PAS; 4-ami­
nosalicylic acid) is an oral agent used in the treatment of drug-resistant 
TB. Its bacteriostatic activity is due to inhibition of folate synthesis and 
of iron uptake. PAS has relatively little activity as an anti-TB agent. 
Adverse effects may include high-level nausea, vomiting, and diarrhea. 
PAS may cause hemolysis in patients with glucose-6-phosphate dehy­
drogenase deficiency. The drug should be taken with acidic foods to 
improve absorption. Enteric-coated PAS granules (4 g orally every 

8 h) appear to be better tolerated than other formulations and produce 
higher therapeutic blood levels. PAS has a short half-life (1 h), and 80% 
of the dose is excreted in the urine.
■
■DRUGS IN DEVELOPMENT
The pipeline of novel TB drugs is rapidly changing. We direct the 
reader to the Working Group on New TB Drugs for the most up-todate information (https://www.newtbdrugs.org/pipeline/clinical).
NONTUBERCULOUS MYCOBACTERIA
More than 180 species of NTM have been identified. Only a minor­
ity of these environmental organisms, which are extensively found in 
soil and water, are important human pathogens. NTM cause extensive 
disease primarily in persons with preexisting pulmonary disease or 
immunocompromise but can also cause nodular/bronchiectatic dis­
ease in otherwise seemingly healthy hosts. Disseminated infections 
with NTM are common in immunocompromised individuals. NTM 
are also important causes of skin and soft tissue infections in surgi­
cal settings. The two major classes of NTM are the slow-growing and 
rapidly growing species; subcultures of the latter grow within 1 week. 
The growth characteristics of NTM have diagnostic, therapeutic, and 
prognostic implications. The rate of growth can provide useful pre­
liminary information within a specific clinical context, in that growth 
within 2–3 weeks is much more likely to indicate an NTM than M. 
tuberculosis. When NTM do grow from cultures, colonization should 
be distinguished from active disease to optimize the risk and benefit 
of prolonged treatment with multiple medications. According to the 
recommendations of the American Thoracic Society and the Infectious 
Diseases Society of America, significant clinical manifestations and/
or radiographic evidence of progressive disease consistent with NTM 
infection as well as either reproducible sputum culture results or a 
single positive culture from bronchoscopy are required for the diagno­
sis of NTM pulmonary disease. Isolation of NTM from blood or from 
an infected extrapulmonary site, such as soft tissue or bone, is usually 
indicative of disseminated or local NTM infection (Chap. 185). Treat­
ment of NTM disease is prolonged and requires multiple medications. 
Side effects of the regimens employed are common, and intermittent 
therapy is often used to mitigate these adverse events. Treatment 
regimens depend on the NTM species, the extent or type of disease, 
and—to some degree—drug susceptibility test results.
■
■THERAPEUTIC CONSIDERATIONS FOR 

SPECIFIC NTM
Slowly Growing Mycobacteria 
Slowly growing mycobacteria 
can be divided into three categories based on their pigment-producing 
capabilities and—if they do produce pigment—their requirement for 
light to do so. Photochromogens, including M. marinum and M. kansasii, 
can produce yellowish-orange pigment only when exposed to light. 
Scotochromogens, including Mycobacterium gordonae and Mycobac­
terium scrofulaceum, can make pigment regardless of light exposure. 
MAC organisms and Mycobacterium ulcerans are nonchromogens—i.e., 
are incapable of making pigment irrespective of light exposure.
MYCOBACTERIUM AVIUM COMPLEX  Among the NTM, MAC organisms 
most commonly cause human disease. In immunocompetent hosts, 
MAC species are most often found in conjunction with underlying 
significant lung disease, such as chronic obstructive pulmonary dis­
ease or bronchiectasis. For patients with nodular or bronchiectatic 
MAC lung disease, an initial regimen consisting of clarithromycin or 
azithromycin, rifampin or rifabutin (the latter is preferred for HIV 
patients receiving ART), and ethambutol is given three times per week 
for at least 12 months after culture conversion. A daily regimen of these 
three drugs, with consideration of amikacin or streptomycin in the 
initial treatment phase, is recommended for patients with fibrocavitary 
MAC lung disease or severe nodular/bronchiectatic disease. Routine 
initial testing for macrolide resistance is recommended, as is testing at 
6 months with a failing regimen (i.e., with cultures persistently positive 
for NTM). Interpretation of susceptibility tests to drugs other than 
macrolides and aminoglycosides is hampered by poor correlation with

clinical outcomes. Amikacin has been reformulated as a liposomal sus­
pension for inhalation with increased penetration into airway biofilms. 
The CONVERT trial showed that addition of inhaled liposomal amika­
cin to standard three-drug regimen of azithromycin or clarithromycin, 
rifampin, and ethambutol in treatment-refractory (persistent sputum 
positivity after at least 6 months) MAC lung disease significantly 
increased culture conversion rates from 9 to 26% at 6 months. Respira­
tory adverse events (primarily dysphonia, cough, and dyspnea) were 
reported in 87.4% of patients receiving inhaled liposomal amikacin 
compared to 50% in the standard therapy group; however, rates of seri­
ous adverse events were not different between the regimens. Inhaled 
liposomal amikacin is now approved for use in refractory pulmonary 
MAC infections (persistent positive cultures after at least 6 months of 
treatment). It is currently being evaluated as a first-line agent and as a 
replacement for rifampin in the treatment of MAC lung disease.
Surgical resection should be considered for individuals whose infec­
tion is localized to one lung, who have adequate lung function to toler­
ate lung resection, who have had a poor response to medical therapy, 
and/or who have developed macrolide-resistant MAC disease.
Treatment of MAC in persons living with HIV should be initiated 
in consultation with an infectious diseases specialist. For HIV-infected 
patients with well-controlled HIV disease and CD4 T-cell counts in 
the normal range, MAC treatment is identical to patients without HIV 
disease except that drug-drug interactions between antimycobacterial 
agents and ART should be carefully considered. HIV-infected patients 
with low CD4 count (CD4+ T-cell count <100/μL) are at risk for dis­
seminated MAC infection. MAC disease in these patients is generally 
treated with clarithromycin, ethambutol, and rifabutin. Azithromycin 
may be preferred to clarithromycin depending on adverse effects and 
patient tolerance. Amikacin and fluoroquinolones are often used in 
salvage regimens. Treatment for disseminated MAC infection in AIDS 
patients may be lifelong in the absence of immune reconstitution. 
Therapy is recommended for at least 12 months after culture conver­
sion and at least 6 months of effective immune reconstitution with ART 
(CD4+ T-cell count >100/μL).
MYCOBACTERIUM KANSASII  M. kansasii is the second most common 
NTM causing human disease in the United States. It is also the second 
most common cause of NTM pulmonary disease in the United States, 
where it is most commonly reported in the southeastern region. 
M. kansasii infection can be treated with rifampin, ethambutol, and 
either isoniazid or macrolide; therapy continues for at least 18 months or 
for 12 months after culture conversion. The American Thoracic Society 
and the Infectious Diseases Society of America recommend routine 
susceptibility testing to rifampin only. Resistance to isoniazid and eth­
ambutol can be acquired during therapy but is usually associated with 
rifampin resistance as well. Rifampin-resistant M. kansasii is treated with 
a three-drug regimen including agents such as ciprofloxacin, azithromy­
cin, ethambutol, rifabutin, amikacin, trimethoprim-sulfamethoxazole, 
and streptomycin after drug susceptibility testing.
MYCOBACTERIUM MARINUM  M. marinum is an NTM found in salt water 
and freshwater, including swimming pools and fish tanks. It is a cause of 
localized soft tissue infections, which may require surgical management. 
Combination regimens include clarithromycin and either ethambutol 
or rifampin. Other agents with activity against M. marinum include 
doxycycline, minocycline, and trimethoprim-sulfamethoxazole. Drug 
susceptibility testing is recommended only if the swab remains culture 
positive after 3 months of appropriate therapy.
Rapidly Growing Mycobacteria 
Rapidly growing mycobacteria 
causing human disease include Mycobacterium abscessus, Mycobac­
terium fortuitum, and Mycobacterium chelonae. Treatment of these 
mycobacteria is complex and should be undertaken with input from 
experienced clinicians. It is important to note that testing rapidly 
growing mycobacteria for macrolide resistance is tricky, as an induc­
ible erm gene may confer in vivo macrolide resistance to isolates that 
are susceptible in vitro.
M. abscessus is the third most common NTM pathogen in the 
United States. It is endemic in the southeastern states between Texas 

and Florida. Skin, soft tissue, and bone infections occur, usually after 
accidental trauma or surgery. This organism appears to have a pre­
dilection to cause lung infections in white nonsmoking women aged 
>60 who have no preexisting lung disease. M. abscessus isolates are 
usually resistant to standard anti-TB regimens. Skin and soft tissue 
infections are usually treated for a minimum of 4 months with a mac­
rolide (clarithromycin or azithromycin) and a parenteral agent such 
as amikacin, cefoxitin, or imipenem. Bone infections are treated for 
at least 6 months. This regimen can be used for the treatment of lung 
infections but is often unsuccessful because of drug adverse effects and 
toxicities. A regimen comprising a combination of at least three active 
drugs (amikacin, linezolid, tigecycline, imipenem, azithromycin, pro­
vided the organism is macrolide susceptible) is recommended based on 
in vitro drug susceptibility testing. A recent meta-analysis has shown 
that overall therapeutic efficiency rates in M. abscessus lung infection 
are low at ~35%; however, incorporation of amikacin, imipenem, line­
zolid, and/or tigecycline was associated with improved outcomes. Con­
versely, macrolide resistance has been associated with worse outcomes. 
Surgical resection should be considered in all patients with good lung 
reserve and a localized infection.

■
■DRUGS FOR THE TREATMENT OF NTM
Clarithromycin 
Clarithromycin is a macrolide antibiotic with 
broad activity against many gram-positive and gram-negative bacteria 
as well as NTM. This drug is active against MAC organisms and many 
other NTM species, inhibiting protein synthesis by binding to the 50S 
mycobacterial ribosomal subunit. NTM resistance to macrolides is 
probably caused by overexpression of the gene ermB, with consequent 
methylation of the binding site. Strains of M. abscessus subsp. abscessus 
harbor an inducible macrolide resistance mechanism coded by erm41, 
which leads to ribosomal methylation and becomes apparent after 
macrolide incubation of 3−5 days, significantly hampering treatment 
success. Twenty percent of strains have a nonfunctional erm41 gene. 
Clarithromycin is well absorbed orally and distributes well to tissues. 
It is cleared both hepatically and renally; the dosage should be reduced 
in renal insufficiency. Clarithromycin is a substrate for and inhibits 
cytochrome 3A4 and should not be administered with cisapride, pimo­
zide, or terfenadine because cardiac arrhythmias may occur. Numerous 
drugs interact with clarithromycin through the CYP3A4 metabolic 
pathway. Rifampin lowers clarithromycin levels; conversely, rifampin 
levels are increased by clarithromycin. However, the clinical relevance 
of this interaction does not appear to be great.
CHAPTER 186
Antimycobacterial Agents
For patients with nodular/bronchiectatic MAC infection, the dosage 
of clarithromycin is 500 mg, given morning and evening three times a 
week. For the treatment of fibrocavitary or severe nodular/bronchiectatic 
MAC infection, a dose of 500–1000 mg is given daily. Disseminated 
MAC infection is treated with 1000 mg daily. Clarithromycin is used in 
combination regimens that typically include ethambutol and a rifamy­
cin in order to avoid the development of macrolide resistance. Adverse 
effects include frequent gastrointestinal intolerance, hepatotoxicity, 
headache, rash, and rare instances of hypoglycemia. Clarithromycin 
is contraindicated during pregnancy because of its teratogenicity in 
animal models.
Azithromycin 
Azithromycin is a derivative of erythromycin. 
Although technically an azalide and not a macrolide, it works similarly 
to macrolides, inhibiting protein synthesis through binding to the 50S 
ribosomal subunit. Azithromycin is preferred over clarithromycin due to 
once-daily dosing, better tolerability, fewer drug interactions, and equal 
efficacy. Resistance to azithromycin is almost always associated with com­
plete cross-resistance to clarithromycin. Azithromycin is well absorbed 
orally, with good tissue penetration and a prolonged half-life (~48 h). The 
usual dosage for treatment of MAC infection is 250 mg daily or 500 mg 
three times per week. Azithromycin is used in combination with other 
agents to avoid the development of resistance. For prophylaxis against dis­
seminated MAC infection in immunocompromised individuals, a dose of 
1200 mg once per week is given. Because azithromycin is not metabolized 
by cytochrome P450, it interacts with few drugs. Adjustment of the dos­
age on the basis of renal function is not necessary.