# 072

# Pages 1776-1800

___________________________________________________________________
Hypophosphataemia
Definition
•
serum phosphate level of less than 2.5 mg/dL (0.8 mmol/L).
Causes
Causes
Consequences
•
alcohol excess
•
acute liver failure
•
diabetic ketoacidosis
•
refeeding syndrome
•
primary hyperparathyroidism
•
osteomalacia
•
Hyperventilation
Mechanisms 
•
The three major mechanisms of hypophosphataemia are:
1. Redistribution of extracellular phosphate into cells

hyperventilation respiratory alkalosis activating phosphofructokinase 
moves phosphate into cells stimulates intracellular glycolysis. 

Glycolysis leads to phosphate consumption as phosphorylated glucose 
precursors are produced. 

Any cause of hyperventilation (eg, sepsis, anxiety, pain, heatstroke, alcohol 
withdrawal, diabetic ketoacidosis [DKA], hepatic encephalopathy, salicylate 
toxicity, neuroleptic malignant syndrome [NMS]) can precipitate 
hypophosphatemia. 
2. Decreased intestinal absorption,

chronic diarrhea, 

malabsorption syndromes, 

severe vomiting,

nasogastric (NG) tube suctioning.
3. Depletion due to increased urinary loss.

the most common cause of hypophosphatemia 
primary and secondary hyperparathyroidism. 
Osmotic diuresis, such as seen in hyperosmolar hyperglycemic 
syndrome (HHS) 

Fanconi syndrome (proximal tubule dysfunction)
X linked hypophosphataemic rickets
Oncogenic hypophosphataemic osteomalacia
MRCPUK- part-1-Sep 2017: what is the mechanism of Hypophosphataemia during 
treatment of DKA?
Shift from extracellular to intracellular space
Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

•
red blood cell haemolysis
•
white blood cell and platelet dysfunction
•
muscle weakness and rhabdomyolysis
•
central nervous system dysfunction

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
 
MRCPUK-part-1-Sep 2017: what is the mechanism of Hypophosphataemia in alcoholic 
patients after hospital admission ?
Shift from extracellular to intracellular space

The alcoholic patient often has chronic phosphate depletion, and, after 
admission to the hospital, is prone to severe hypophosphatemia resulting from 
redistribution of extracellular phosphate into the cells. 

Two factors may contribute to this shift:
1. I.V therapy with dextrose-containing solutions or refeeding ↑Glucose 
↑ insulin release ↑ phosphate uptake by the cells 
2. alcohol withdrawal hyperventilation acute respiratory alkalosis
intracellular alkalosis stimulates intracellular phosphofructokinase 
↑ glycolysis movement of phosphate into cells
___________________________________________________________________
Hyperphosphataemia
Overview
•
The healthy adult usually ingests about 8400 mg per week of phosphate through their 
diet
•
Absorption occurs mainly in the jejunum
•
Renal reabsorption: the majority (70%) of filtered phosphate is reabsorbed by type 2a 
sodium phosphate cotransporters located on the apical membrane of the renal proximal 
tubule.
•
The normal adult range for phosphorus is 2.5-4.5 mg/dL (0.81-1.45 mmol/L). 
•
Renal excretion : About 5400 mg of phosphate is excreted per week through the 
kidneys.
Causes 
•
Usually iatrogenic
•
↓calcium + ↑phosphate levels seen in (decreased phosphate excretion)
renal failure 
hypoparathyroidism, and pseudohypoparathyroidism
•
↑calcium + ↑phosphate seen in
vitamin D intoxication (↓PTH + ↑vitamin D)
milk-alkali syndrome (↓PTH + ↓vitamin D)
•
Disorder that shifts intracellular phosphate to extracellular space
Tumor lysis
Rhabdomyolysis
•
Increased phosphate intake (e.g., phosphate-containing enemas)
Laxative (Phospho-soda) abuse
Foods that are characteristically rich in phosphate include: dairy products,
(Cheddar cheese ), fibre rich foods, chocolate, and processed meats.
Features
•
Often asymptomatic
•
High PO43- levels cause the formation of an insoluble compound with calcium, which can 
lead to:
Hypocalcemia → hypocalcemic symptoms (muscle cramps, tetany, and perioral 
numbness or tingling).
Nephrolithiasis
Calcifications in the skin

Management
•
Treat the underlying cause.
•
Discontinue phosphate intake (dietary or medication).
•
Give phosphate binders (e.g., aluminium hydroxide, calcium carbonate). 
•
Consider dialysis (especially in severe cases of hyperphosphatemia in patients with renal 
failure).
___________________________________________________________________
Collagen Types
Types of collagen
Tissue distribution
Related conditions
Type I 
Bone (produced by osteoblasts), skin, tendons, 
collagen 
ligaments, fascia, dentin, cornea, internal organs, scar 
(90% of 
tissue (late stages of wound healing)
body 
collagen)
Type II 
Cartilage (including hyaline), vitreous humor of the eye, 
collagen
intervertebral discs (nucleus pulposus)
Type III 
Reticular fibers in skin, blood vessels, granulation tissue, 
collagen 
uterus, scar tissue (early stages of wound healing), fetal 
(reticulin)
tissue in early embryos and throughout embryogenesis
Type IV 
Basement membranes, lens
Alport syndrome: 
collagen
Type V 
Bone, skin, fetal tissue, placenta
Ehlers-Danlos syndrome 
collagen
________________________________________________________________
Vitamin B3 (Niacin) deficiency 
Causes
•
Malnutrition
•
Heavy drinking (more common in alcoholics)
•
Conditions associated with tryptophan deficiency
Hartnup disease: decreased renal and intestinal tryptophan absorption
Carcinoid syndrome (if metabolically active): increased tryptophan metabolism
•
Vitamin B6 deficiency (e.g., due to treatment with isoniazid): decreased niacin synthesis 
from tryptophan.
Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

Osteogenesis imperfecta 
type I: decreased 
production
Achondrogenesis (type II)
Ehlers-Danlos syndrome 
(vascular type): decreased 
production
decreased production
Goodpasture syndrome: 
autoantibodies target type 
IV collagen
(classic type)

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
 
•
Chronic consumption of grains that have not been processed by nixtamalization (common 
cause in developing countries)
Features
•
Atrophic glossitis 
the tongue is pink or red
appears glossy and smooth due to the atrophy of papillae. 
can be painful.
•
Pellagra (caused by severe deficiency)
Characteristic dermatitis

Circular broad collar rash on the neck (Casal necklace); affects dermatomes 
C3 and C4

Hyperpigmented skin lesions in sun-exposed areas (especially on the limbs) 
Diarrhea and vomiting
Neurologic symptoms (e.g, dementia, hallucinations, anxiety, insomnia, 
encephalopathy)
____________________________________________________
itamin C (ascorbic acid) (scurvy)
•
Vitamin C is a water soluble vitamin.
•
Dehydroascorbic acid, the oxidative product of ascorbic acid metabolism, passively 
penetrates cellular membranes and is the preferred form for erythrocytes and leukocytes.
Functions
•
Antioxidant (Ascorbic acid provides electrons needed to reduce molecular oxygen. These 
anti-oxidant capabilities also stabilize vitamin E and folic acid. )
•
It is a cofactor for reduction of folate to dihydro-and-tetrahydrofolate.
Therefore macrocytic anaemia in scurvy may occur due to two reasons: 

oxidative hemolysis and 

folate metabolism defects.
•
collagen synthesis: acts as a cofactor for enzymes that are required for the hydroxylation 
proline and lysine in the synthesis of collagen
Vitamin C deficiency (scurvy) leads to defective synthesis of collagen resulting in 
capillary fragility (bleeding tendency) and poor wound healing
•
facilitates iron absorption
•
cofactor for norepinephrine synthesis
•
cofactor for reduction of folate to dihydro-and-tetrahydrofolate.
Causes
•
occurs in people with poor dietary intake, who eat little or no fruit and vegetables, 
commonly alcoholics and elderly people existing on a ‘tea and toast’ diet.
•
Pregnancy, lactation and thyrotoxicosis increase ascorbic acid requirements and may 
precipitated scurvy.
Features vitamin C deficiency
•
gingivitis, loose teeth
•
poor wound healing
Pellagra
The classical features are the 3 D's - Dermatitis, Diarrhoea and Dementia.
Caused by nicotinic acid (niacin) deficiency.

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

•
bleeding from gums, haematuria, epistaxis
•
general malaise
•
anaemia
macrocytic anaemia in scurvy may occur due to two reasons: oxidative 
hemolysis and folate metabolism defects.
normochromic, normocytic anaemia reflects bleeding into tissues
Continued deficiency leads to:
•
Anaemia
•
Myalgia
•
Bone pain
•
Bruising
•
Petechial and perifollicular 
haemorrhages
•
Corkscrew hairs
•
Mood changes
•
Fragility
•
scleral icterus (late, probably secondary to 
haemolysis), and
•
pale conjunctiva.
•
Fractures, dislocations and tenderness of 
bones are common in children.
•
Bleeding into muscles and joints may be 
seen
Late stages can lead to:
•
Generalised oedema
•
Severe jaundice
•
Haemolysis
•
Haemorrhage
•
Neuropathy
•
Convulsions, and
•
Death.
The classical skin manifestations of scurvy are:
•
perifollicular hyperkeratotic papules
•
perifollicular haemorrhages
•
purpura, and
•
ecchymoses.
Treatment
•
vitamin C supplementation, 
•
recovery is usually complete within three months.
_____________________________________________________________________________________
Vitamin B12 deficiency
Overview
•
Vitamin B12 is mainly used in the body for red blood cell development and also 
maintenance of the nervous system.
•
It is absorbed after binding to intrinsic factor (secreted from parietal cells in the stomach) 
and is actively absorbed in the terminal ileum.
•
A small amount of vitamin B12 is passively absorbed without being bound to intrinsic factor.
Approximately 1 percent of a large oral dose of vitamin B12 is absorbed by this 
second mechanism. This pathway is important in relation to oral replacement.
•
Once absorbed, vitamin B12 binds to transcobalamin II and is transported throughout the 
body.
•
Exhaustion of vitamin B12 stores usually occurs after 12 to 15 years of absolute vitamin 
B12 deficiency.
Causes 
•
Malabsorption
↓ Intrinsic factor (IF)

Atrophic gastritis due to
Autoimmune atrophic gastritis: most common cause of vitamin B12 
deficiency

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
 
H. pylori infection

Gastrectomy
Reduced uptake of IF-vitamin B12 complex in terminal ileum due to:

Alcohol use disorder

Crohn disease, celiac disease

Pancreatic insufficiency

Surgical resection of the ileum

Diphyllobothrium latum (tapeworm) infection

Bacterial overgrowth

Enteritis

Achlorhydria
•
Malnutrition
Strict vegan diets: occurs only after years of a strict diet that excludes all animal 
products (unlike folate deficiency, which occurs within a few months of insufficient 
intake)
•
Increased demand: e.g., during pregnancy, breastfeeding, fish tapeworm 
(Diphyllobothrium latum) infection
•
Metformin (Chronic metformin use results in vitamin B12 deficiency in 30% of patients)
Features 
•
Macrocytic anaemia
•
Sore tongue and mouth
•
Neurological symptoms: 
Peripheral neuropathy
Subacute combined degeneration of spinal cord
The neurological symptoms can occur without anemia
•
Autonomic dysfunction: impotence and incontinence
•
Psychiatric disorders symptoms: including impaired memory, irritability, depression, 
dementia and, rarely, psychosis
•
Cardiovascular effect:
Similar to folic acid deficiency, vitamin B12 deficiency produces 
hyperhomocysteinemia, which is an independent risk factor for atherosclerotic 
disease. 
Serum high concentrations of homocysteine and low levels of folic acid and vitamin 
B12 are significantly correlated with the categories of coronary artery diseases
Investigations
•
Serum cobalamin levels are the initial test

A normal serum cobalamin level does not exclude cobalamin deficiency.
•
Diagnosis of vitamin B12 deficiency is typically based on measurement of serum 
vitamin B12 levels; however, about 50 percent of patients with subclinical disease 
have normal B12 levels.
•
A more sensitive method of screening for vitamin B12 deficiency is measurement of 
serum methylmalonic acid and homocysteine levels, which are increased early in 
vitamin B12deficiency.
elevated methylmalonic acid level is more specific for vitamin B12 deficiency 
than an elevated homocysteine level. 
Vitamin B12 or folic acid deficiency can cause the homocysteine level to rise, so folic 
acid levels also should be checked in patients with isolated hyperhomocysteinemia. 
two enzymatic reactions are known to be dependent on vitamin B12.

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

1.
methylmalonic acid is converted to succinyl-CoA using vitamin B12 as a 
cofactor. Vitamin B12 deficiency, therefore, can lead to increased levels of 
serum methylmalonic acid. 
2. homocysteine is converted to methionine by using vitamin B12 and folic acid 
as cofactors. In this reaction, a deficiency of vitamin B12 or folic acid may lead 
to increased homocysteine levels.
Management
•
if no neurological involvement 1 mg of IM hydroxocobalamin 3 times each week for 2 
weeks, then once every 3 months
oral vitamin B12 has been shown to have an efficacy equal to that of injections
in the treatment of pernicious anemia and other B12 deficiency states.

Although the daily requirement of vitamin B12 is approximately 2 mcg, the 
initial oral replacement dosage consists of a single daily dose of 1,000 to 
2,000 mcg. This high dose is required because of the variable absorption of 
oral vitamin B12 in doses of 500 mcg or less.
•
if a patient is also deficient in folic acid then it is important to treat the B12 deficiency first to 
avoid precipitating subacute combined degeneration of the cord
Large amounts of folic acid can mask the damaging effects of vitamin B12 
deficiency by correcting the megaloblastic anemia caused by vitamin B12 deficiency 
without correcting the neurological damage that also occurs
Sep 2017 part 1: Which structure in the body are able to synthesize vitamin B12?
gut bacteria

It is synthesized by gut bacteria in humans, but humans cannot absorb the B12 made 
in their guts, as it is made in the colon which is too far from the small intestine, where 
absorption of B12 occurs.

Therefore  diet is the only source of vit B12.
_____________________________________________________________________________________
Vitamin B1 (Thiamine) deficiency 
Overview 
•
the biologically active form of this vitamin is thiamine pyrophosphate (TPP) 
•
the most important biochemical reactions requiring the availability of thiamine includes
glycolysis and tricarboxylic acid (TCA) cycle.
•
There are three enzymes that require the presence of thiamine pyrophosphate as a cofactor:
1. a-ketoglutarate dehydrogenase
2. branched chain amino acid dehydrogenase
3. pyruvate dehydrogenase
Causes
•
Heavy alcohol drinking
•
Malnutrition, starvation
•
Malabsorption
•
Malignancy

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
Pathophysiology
•
Thiamine deficiency → impaired glucose breakdown → ATP depletion → tissue damage 
that primarily affects highly aerobic tissues (e.g., brain, heart)
•
High-dose glucose infusions lead to increased ATP depletion, which can trigger Wernicke 
encephalopathy.
In malnourished individuals and chronic alcohol users/heavy drinkers, 
thiamine should be administered before glucose infusions.
Features
•
Beriberi: inadequate thiamine uptake due to malnutrition, heavy drinking, or increased 
demand (e.g., hyperthyroidism, pregnancy)
Dry beriberi

Symmetrical peripheral neuropathy (sensory and motor)

Progressive muscle wasting

Paralysis

Confusion
Wet beriberi

Oedema

High-output cardiac failure (dilated cardiomyopathy)
•
Wernicke encephalopathy
The triad of: Encephalopathy, Ataxia and Oculomotor dysfunction (usually 
nystagmus)
•
Korsakoff's psychosis 
characterised by both anterograde and retrograde amnesia with confabulation
What happens if you do not give the thiamine first before starting an intravenous glucose 
infusion?
•
ATP failing to be adequately generated
•
The inability of pyruvate to enter the TCA cycle → accumulate of pyruvate → pyruvate
converted to lactate in order to be able to maintain glycolysis →↑acidosis.
•
Inability of the pentose phosphate pathway to protect the cell from reactive oxygen 
species that damage cellular structures, results in either cell death or activation of 
apoptosis.
Vitamin function as a co-factors:
Biotin for carboxylase reactions.
Thiamine for dehydrogenase reactions 
B9 (folate) for transferases. 
Vit C for hydroxylases. 
_____________________________________________________________________________________
Vitamin E deficiency
Active form: tocopherol
Function
•
Lipid-soluble antioxidant in the glutathione peroxidase pathway removes the free 
radical intermediates  protects cell membranes from oxidation by reacting with lipid 
radicals produced in the lipid peroxidation chain reaction.
Therapeutic uses → Nonalcoholic steatohepatitis

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

Features
•
Neurologic dysfunction
Demyelination of the posterior column and spinocerebellar tract → ↓ proprioception 
and vibration sensation; ataxia
Neurologic symptoms are similar to vitamin B12 deficiency, except that vitamin E 
deficiency does not lead to hypersegmented neutrophils, megaloblastic anemia, and 
increased methylmalonic acid levels.
•
Hemolytic anemia; increased fragility of erythrocytes and membrane breakdown
•
Acanthocytosis
•
Muscle weakness
Hypervitaminosis E  
•
interfere with vitamin K metabolism →vitamin K deficiency →increased tendency to 
bleed.
____________________________________________________
Vitamin K Deficiency
Sources of vitamin K
•
Leafy green vegetables (vitamin K1)
•
Synthesized in small amounts by intestinal bacteria
Functions
•
Cofactor for γ-carboxylation of glutamate residues on vitamin-K-dependent proteins 
involved in:
Coagulation: maturation of factors II (prothrombin), VII, IX, and X, protein C, 
protein S
Bone formation: osteocalcin (bone Gla protein), matrix Gla protein
Causes
•
Liver failure
•
Fat malabsorption
•
Prolonged broad-spectrum antibiotic therapy
•
Vitamin K antagonists (e.g., warfarin)
Features
•
Hemorrhage (e.g., petechiae, ecchymoses)
•
Vitamin K deficiency bleeding (VKDB)
↑ PT and aPTT, normal bleeding time
Postnatal prophylaxis: vitamin K injection at birth
___________________________________________________________________
Vitamin A deficiency
Over view of vitamin A
•
Active forms: Retinal and Retinoic acid
•
Sources
Plant sources; yellow and leafy vegetables
Animal sources: in storage form; liver
Causes
•
Disorders associated with fat malabsorption: inflammatory bowel disease (e.g., Crohn 
disease), celiac disease, cystic fibrosis, pancreatic insufficiency

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
 
Features
•
Ocular manifestations
Night blindness (nyctalopia)
Xerophthalmia
Keratomalacia
Bitot spots: gray, triangular, dry patches on the bulbar conjunctiva, covered by a 
layer with a foamy appearance

Typical sign of vitamin A deficiency

Caused by squamous cell metaplasia and keratinization of the conjunctiva
•
Keratinizing squamous metaplasia of the bladder (pearl-like plaques on cystoscopy)
•
Xerosis cutis (dry skin)
•
Immunosuppression
0BVitamin A toxicity
Causes: increased intake via supplements or drugs
Acute toxicity: Nausea, vomiting, Vertigo, Blurred vision
Chronic toxicity: 

Alopecia, Dry skin, scaling

Arthralgias

Hepatosplenomegaly, hepatic toxicity

Pseudotumor cerebri
Which substances in vitamin A is most likely to be maximally involved in correcting the 
visual disturbance?
Retinaldehyde

Retinaldehyde is derived from the oxidation of retinol
What would you give the patient who taking long term steroids to help his wound heal 
faster?
Vitamin A

Vitamin A is believed to counteract the effect of steroids on slowing wound 
healing by stimulating TGF-beta and IGF-I, as well as collagen production. However, 
high levels (which can accumulate because vitamin A is fat soluble) can also be toxic 
and inhibit collagen synthesis, such as in the skin.

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

__________________________________________________________
Vitamin deficiency
The table below summarises vitamin deficiency states
Vitamin
Chemical name
Deficiency state
A
Retinoids
Night-blindness (nyctalopia). dry skin.
B1
Thiamine
Beriberi
•
polyneuropathy, Wernicke-Korsakoff syndrome
•
heart failure (dilated cardiomyopath)
B2 
(riboflavin)
Angular stomatitis, cheilosis, corneal vascularization
B3
Niacin
Pellagra
•
dermatitis
•
diarrhoea
•
dementia
B6
Pyridoxine
Anaemia, irritability, seizures
B7
Biotin
Dermatitis, seborrhoea
B9
Folic acid
Megaloblastic anaemia, deficiency during pregnancy - neural tube 
defects
B12
Cyanocobalamin
Megaloblastic anaemia, peripheral neuropathy
C
Ascorbic acid
Scurvy
•
gingivitis
•
bleeding
•
poor wound healing
D
Ergocalciferol, 
cholecalciferol
Rickets, osteomalacia
E
Tocopherol, 
tocotrienol
↑ fragility of RBCs. Mild haemolytic anaemia in newborn infants, ataxia, 
peripheral neuropathy
K
Naphthoquinone
Haemorrhagic disease of the newborn, bleeding diathesis
Selenium
Selenium
Keshan disease (cardiomyopathy).

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 14

Basicsciences Biochemistry&metabolsm
__________________________________________________________
Zinc deficiency
Features
•
perioral dermatitis: red, crusted lesions
•
(rough and dry skin)
•
acrodermatitis
•
alopecia
•
short stature (dwarfism)
•
hypogonadism
•
hepatosplenomegaly
•
geophagia (ingesting clay/soil)
•
cognitive impairment
Treatment
•
Zn supplementation has been shown to improve neuropsychological function in Chinese 
children.
•
Zn deficiency is associated with adverse pregnancy outcomes.
__________________________________________________________
Pyruvate kinase
•
Pyruvate kinase is the rate-limiting step in glycolysis and gluconeogenesis
•
It catalyses the transfer of a phosphate group from phosphoenolpyruvate to ADP, yielding a 
molecule of pyruvate and a molecule of ATP
•
Deficient pyruvate kinase activity may result in the development of hereditary 
haemolytic anaemias
Which biochemical processes is likely to contribute most to energy creation in long 
distance running?
Fatty acid oxidation

Third edition
Notes & Notes
For MRCP part 1 & 11
By
Dr. Yousif Abdallah Hamad
Basic sciences
Immunology 
Updated

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 15

 Basic sciences Immunology
 
Human leukocyte antigen (HLA)
Overview
•
The human leukocyte antigen (HLA) is a gene complex that encodes the major 
histocompatibility complex (MHC) proteins.
•
MHC proteins play a vital role in initiating immune responses as they present antigen 
fragments to T cells and bind T-cell receptors.
•
Found on chromosome  6
•
2 classes:
Class I → HLA  A , B, C

expressed on all cells, except erythrocytes and trophoblasts

interact with CD8+
class II → HLA DP, DQ, DR

expressed on B cells, dendritic cells, and monocytes

most important in transplant → (DR)
MRCP- part-1-2018: Which HLA subtypes is usually implicated with respect to matching 
for avoiding hyperacute rejection?
HLA-C

Anti-HLA-C IgG antibodies are usually implicated in hyperacute rejection; 
specifically, 

HLA-CW5 subtype antibodies have been implicated most in hyperacute rejection of 
renal transplant.
MHC I-associated loci (HLA-A/-B/-C) only have 1 letter after the hyphen, while MHC IIassociated loci (HLA‑ DR/‑ DP/‑ DQ) have 2 letters.

HLA associations 
•
The most important HLA associations are listed below:
Associated diseases
HLA type
Hemochromatosis
HLA-A3
Behcet's disease HLA B51 is a split of B5
HLA-B5
21-hydroxylase deficiency
HLA-B47
Psoriasis
HLA-CW6
Diabetes mellitus type 1(but more with HLA-DR4)
HLA-DR3 + DR4 combined
steroid-responsive nephrotic syndrome
HLA-DR7
HLA-DR2
HLA-DR4
HLA-B27
HLA-DR3
_____________________________________________________________________________________
Cluster of Differentiation (CD Markers)
Function and usage of CDs:
•
The CD system is commonly used as cell markers in immuno-phenotyping, allowing cells 
to be defined based on what molecules are present on their surface.
•
often acting as receptors or ligands (the molecule that activates a receptor)
•
cell signaling: Errors in cellular information processing are responsible for diseases such 
as cancer, autoimmunity, and DM
•
Cell adhesion: essential for the pathogenesis of infectious organisms, eg: 
HIV has an adhesion molecule termed gp120 that binds to its ligand CD4, which 
is expressed on lymphocyte.
Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

Narcolepsy
Goodpasture's
hay fever, 
systemic lupus erythematosus, 
multiple sclerosis.
Felty's syndrome (90% ) →most common
Rheumatoid arthritis (70%)
Diabetes mellitus type 1 (> DR3)
Drug-induced SLE
IgA nephropathy
HOCM
Ankylosing spondylitis
Post-gonococcal arthritis
Reiter's syndrome (reactive arthritis)
Acute anterior uveitis
Autoimmune hepatitis
Primary biliary cirrhosis   
Coeliac disease (95% associated with HLA-DQ2)
Diabetes mellitus type 1
Primary Sjögren syndrome
Dermatitis herpetiformis

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 15

 Basic sciences Immunology
 
The table below lists the major clusters of differentiation (CD) molecules
Cluster of 
differentiation
Function
CD1
MHC molecule that presents lipid molecules
CD2
Found on thymocytes, T cells, and some natural killer cells that acts as a ligand 
for CD58 and CD59 and is involved in signal transduction and cell adhesion
CD3
The signalling component of the T cell receptor (TCR) complex
CD4
Found on helper T cells.
Co-receptor for MHC class II
Used by HIV to enter T cells
CD5
Found in the majority of mantle cell lymphomas
CD8
Found on cytotoxic T cells.
Co-receptor for MHC class I
Found on a subset of myeloid dendritic cells
CD14
Cell surface marker for macrophages
CD15
Expressed on Reed-Sternberg cells (along with CD30)
CD 21
Epstein-Barr virus uses the CD21 receptor to invade B cells.
CD28
Interacts with B7 on antigen presenting cell as costimulation signal
CD95
Acts as the FAS receptor, involved in apoptosis
Clusters of differentiation
•
CD4
Found on helper T cells.
Co-receptor for MHC class II
Used by HIV to enter T cells

GP120 →fuses to CD4 →allow GP41 to penetrate the cell membrane 
•
CD 8
Found on cytotoxic T cells.
Co-receptor for MHC class I
Found on a subset of myeloid dendritic cells 
•
CD14 →Cell surface marker for macrophages
•
CD18 →the absence of it causes Leukocyte adhesion deficiency
GP41 play a role in the initial step for HIV entry into cells
Gp120 fuses to the CD4 receptor, this then allows GP41 to penetrate the cell membrane

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

___________________________________________________________________
Complement pathways 
•
Activation may occur via three pathways:
1. Classical pathway:

Activated by IgM or IgG complexes binding to the pathogen

C1q, C1r, and C1s activation → C1 complex → split of C4 into C4a and C4b 
and C2 into C2a and C2b → formation of C3 convertase (C4b2b) from C4b 
and C2b

C2 is involved in activation via the classical pathway
2. Alternative pathway:

Activated directly by pathogen surface molecules rather than by antigenantibody complexes

C3 is split into C3a and C3b → binding of factor B → formation of C3 
convertase (C3bBb).

Generates early innate response that does not require antibody for activation.
3. Lectin pathway:

Activated by mannose or other sugars on pathogen surface

Mannose-binding lectin (MBL) binds to mannose → formation of the C1-like 
complex, which cleaves C4 into C4a and C4b → C4b binding C2 and splitting 
of C2 into C2a and C2b → formation of C3 convertase (C4b2b).
•
All complement pathways have one final common pathway at C3.
IgG and IgM activate the classic pathway

Chapter 15

 Basic sciences Immunology
 
Hypersensitivity
The Gell and Coombs classification divides hypersensitivity traditionally divides reactions into 4 
types:
Type
Mechanism
Examples
Type I -
Anaphylactic
Antigen reacts with 
IgE bound to mast 
cells
(IgE-mediated )
Type II - Cell bound
IgG or IgM binds to 
antigen on cell 
surface
(antibodymediated)
Type III - Immune
complex
Free antigen and 
antibody (IgG, IgA) 
combine
(Immune complex 
deposition)
Type IV - Delayed 
hypersensitivity
T-cell mediated
(cell-mediated)
Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

• Anaphylaxis
• Atopy (e.g. asthma, eczema and hayfever)
Diagnosed by plasma tryptase (protease 
released from mast cell).
• Autoimmune haemolytic anaemia
• ITP
• Goodpasture's syndrome
• Pernicious anaemia
• Acute haemolytic transfusion reactions
• Rheumatic fever
• Pemphigus vulgaris / bullous pemphigoid
• Serum sickness
• Systemic lupus erythematosus
• Post-streptococcal glomerulonephritis
• Extrinsic allergic alveolitis (especially acute 
phase)
• Tuberculosis / tuberculin skin reaction
• Graft versus host disease
• Allergic contact dermatitis
• Scabies
• Extrinsic allergic alveolitis (especially chronic 
phase)
• Multiple sclerosis
• Guillain-Barre syndrome

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

In recent times a further category has been added:
Type
Mechanism
Examples
Type V
Antibodies that recognise and bind to the cell surface 
receptors.
This either stimulating them or blocking ligand binding
• Graves' disease
• Myasthenia gravis
What is the hallmark signs of mast cell degranulation?
•
Classical wheal and flare
___________________________________________________________________
Anaphylaxis
Definition
•
a severe type 1 hypersensitivity reaction that can cause life-threatening and multisystem 
effects due to IgE-mediated mast cell activation
Pathophysiology
•
Immunoglobulin E is the most common immunoglobulin involved in the 
pathogenesis of anaphylaxis.
•
Anaphylaxis (type I hypersensitivity reaction) or anaphylactoid reactions → degranulation of 
mast cells → massive histamine release → systemic vasodilation → increased capillary 
leakage → anaphylactic shock
•
Mediators involved in the development of anaphylaxis include: Tryptase, histamine, 
leukotrienes, prostaglandins, IL4, IL13 , Heparin and platelet aggregating factor, which are 
generated by mast cell degranulation.
•
Triggers for anaphylactic reactions: heat, cold, sexual activity, exercise
Causes
1. Anaphylaxis (IgE mediated):
Food (e.g. Nuts) - the most common cause in children
Drugs

The most common IgE-mediated triggers are drugs, typically penicillin or 
other beta-lactam antibiotics. 

Neuromuscular blocking agents (eg vecuronium) are responsible for 6070% of allergic reactions related to anaesthesia.
Latex
Venom (e.g. Wasp sting)
2. Anaphylactoid (non-IgE mediated).
The reactions that produce the same clinical picture as anaphylaxis but are not 
IgE mediated.’
plasma proteins or compounds, which act directly on the mast cell membrane, such 
as 

Vancomycin

Chapter 15

 Basic sciences Immunology
 

Quinolone antibiotics

Aspirin or other non-steroidal anti-inflammatory drugs 

Opiates

Colloid plasma expanders

Radiographic contrast media
Anaphylaxis following a blood transfusion can be due to immunoglobulin A deficiency.
Anaphylaxis VS Anaphylactoid 
Is it anaphylactic OR anaphylactoid reaction?
(IgE-mediated anaphylactic 
Is sensitization required?
Yes
No
Can reaction occur in first 
exposure?
How much exposure is needed 
very little (dose independent)
usually more than for 
to elicit reaction?
Is reaction predicted by skin 
allergy test?
Which feature is the most important predictor of anaphylaxis in asthmatic patient with 
peanut allergy? 
Poorly controlled asthma

Poorly controlled asthma is an important risk factor for fatal anaphylaxis in this 
situation.

Patients such as this should have their asthma well controlled and have ready 
access to, and knowledge of how to use, self-injectable adrenaline.
Features (Usually takes 15-30 minutes from the time of exposure to the antigen)
•
Skin or mucous membranes: Flushing, erythema, pruritus, Swelling of the eyelids, 
angioedema
•
Respiratory: hoarseness, Chest tightness, Dyspnea (due to bronchospasm or laryngeal 
edema), tachypnea, Stridor, wheezing, Hypoxia, cyanosis
•
Gastrointestinal: Nausea, vomiting (especially in food allergies), Abdominal pain, diarrhea
•
Cardiovascular: Hypotension, Tachycardia
Investigations
•
Serum mast-cell tryptase: if elevated, supports the diagnosis of anaphylaxis
has a half-life of 2 h, peaking at 1 h after anaphylaxis onset and return to baseline by 
6 hours. 
Both sensitivity and specificity to confirm diagnosis is 95%
Normal tryptase results do not exclude anaphylaxis
•
Complement C4 levels: can be low in hereditary angioedema 
•
Total serum IgE level is non-specific and unhelpful.
Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

Anaphylactic
Anaphylactoid
(Non IgE-mediated 
reactions)
anaphylactic reactions)
No
Yes
anaphylaxis
Yes
No

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

Management
•
Airway assessment and management: Rapid sequence intubation (RSI) for airway 
compromise
•
Adrenaline
the most important drug in anaphylaxis and should be given as soon as possible.
The dose for adult and child > 12 years : 500 micrograms (0.5ml 1 in 1,000)
The best site for IM injection is the anterolateral aspect of the middle third of the 
thigh.
Adrenaline can be repeated every 5 minutes if necessary. 
•
Hydrocortisone 200 mg 
•
Chlorphenamine 10 mg 
•
IV fluids
Evidence from a large randomised controlled trial (RCT) suggests there is no 
difference between normal saline and Hartmann’s solution [also known as Ringer’s 
lactate] for resuscitation of critically ill patients.
•
Observation: It is recommended to observe patients after resolution of an anaphylactic 
episode for 24 hours for possible second-phase reactivation.
Late-phase reaction
In IgE mediated reactions such as asthma or anaphylaxis what therapy inhibits the 
important late-phase reaction? steroids
•
The late phase reaction is due to attraction of T cell, release of leukotrienes and 
prostaglandins often characterised by asthma
•
prevented by the administration of steroids (Hydrocortisone).
•
Approximately 30% of deaths related to anaphylaxis occur as a consequence of this 
late-phase reaction
__________________________________________________________
Exercised induced anaphylaxis
Definition
•
a rare disorder in which anaphylaxis occurs after physical activity.
Features
•
usually occur around 10 minutes after exercise and follow a sequence of pruritus, 
widespread urticaria and then subsequently respiratory distress and vascular collapse. 
Epinephrine injections for anaphylaxis should always be given intramuscularly in a 
concentration of 1:1,000 (as opposed to the 1:10,000 solution used in cardiac arrest). 
Injecting the 1:1,000 solution into a vein can lead to cardiac arrhythmia/arrest.
Antihistamines and steroids should be administered in anaphylaxis only after the initial 
resuscitation measures (IM epinephrine, fluids and/or vasopressors) have been given.
A lack of response to epinephrine, antihistamines, and steroids should raise suspicion of 
differential diagnoses such as bradykinin-mediated angioedema, which requires its own 
specific treatment

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 15

 Basic sciences Immunology
 
Pathophysiology
•
may be related to endorphin release during exercise → excessive histamine release 
from mast cells in susceptible individuals.
Associations
•
Co-factors such as foods, alcohol, temperature, drugs (eg, aspirin and other nonsteroidal 
anti-inflammatory drugs), humidity, seasonal changes, and hormonal changes are important 
in the precipitation of attacks.
•
most associated with wheat ingestion. 
•
The foods most commonly implicated in food-dependent exercise-induced anaphylaxis are 
wheat, shellfish, tomatoes, peanuts, and corn.
•
The patients can usually eat the causative food without problems so long as they do not 
exercise afterwards. 
Treatment
•
managed in the same manner as anaphylaxis.
•
usually resolves on stopping exercise 
•
Reducing physical activity to a lower level may diminish the frequency of attacks.
•
Patients should be instructed on the proper use of emergency injectable epinephrine
and have one available at all times. 
•
Patients should wear a medical alert bracelet with instructions on the use of epinephrine.
__________________________________________________________
Anaphylactic reactions associated with anaesthesia
Risk factors
•
Neuromuscular blocking drugs and latex appear to cause anaphylaxis more commonly in 
female patients
•
Individuals with a history of atopy, asthma or allergy to some foods appear to be at 
increased risk of latex allergy but not anaphylaxis to neuromuscular blocking drugs 
or antibiotics
•
Patients with asthma or taking b-blocking drugs may suffer a more severe reaction.
Causes
•
Neuromuscular blocking agents (NMBAs) 
Most common cause
60% of cases of anaesthesia-related anaphylaxis are due to neuromuscular 
blocking agents.
80% of NMBA reactions occur without prior exposure 
Quaternary ammonium ions (QAI) are proposed to be the allergenic epitopes in 
NMBAs.
Common environmental chemicals such as toothpastes, washing detergents, 
shampoos, and cough medicines share these allergenic epitopes with the NMBAs,
predisposed individual to become sensitised to QAIs and thus be at risk of 
developing anaphylaxis to NMBAs during anaesthesia.
succinylcholine is the NMBA most likely to be associated with allergic 
anaphylaxis (carries the highest risk)
•
Latex
Latex hypersensitivity is the second most common cause of anaesthesia related 
anaphylaxis in many studies (up to 20% of cases). But now decreased due to 
decline in the use of latex gloves.
•
Antibiotics
Approximately 15% of anaesthesia-related anaphylactic episodes are due to 
antibiotics.

Skin testing is only approximately 60% predictive of clinical hypersensitivity. 
Penicillins and

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad


cephalosporins which share the b-lactam ring are responsible for 
approximately 70% of antibiotic-induced anaphylaxis.

There is a higher rate of antibiotic allergy in smokers
•
Anaesthetic induction agents
Anaphylaxis to propofol is very uncommon
Anaphylaxis to thiopental has become extremely uncommon, probably reflecting the 
decline in its use.
•
Antiseptics and disinfectants
Reactions to chlorhexidine have come into greater prominence in recent years.
Anaphylaxis has occurred when chlorhexidine was used as an antiseptic for 
urological and gynaecological procedures as well as insertion of central venous and 
epidural catheters. 
Allowing chlorhexidine to dry before beginning a procedure may reduce the risk of 
reaction.
Anaphylaxis to other antiseptics is rare.
Diagnosis
•
Timings
Type I reactions typically occur within seconds to minutes after i.v. exposure.
An insidious or delayed onset may occur (e.g. with latex, antibiotics, and colloids and
a tourniquet may delay onset until after surgery).
•
History of atopy and asthma has a clear link with latex allergy.
__________________________________________________________
Allergy tests
Skin prick test
•
Most commonly used test as an easy to perform and inexpensive.
•
the first line for detection of allergen-specific IgE
•
Drops of diluted allergen are placed on the skin after which the 
skin is pierced using a needle. 
•
A large number of allergens can be tested in one session.
•
Normally includes a histamine (positive) and sterile water 
(negative) control. 
•
A wheal will typically develop if a patient has an allergy.
•
Can be interpreted after 15 minutes
•
Useful for food allergies and also pollen. It is a reliable way of 
excluding IgE-mediated food allergies, although the positive 
predictive value is around 50% or less (the sensitivity of a 
negative skin prick test to foods is high)
•
It can induce anaphylaxis, and must therefore be done in an 
environment where resuscitation facilities are available.
Radioallergosorbent 
test (RAST)
•
Determines the amount of IgE that reacts specifically with suspected 
or known allergens, for example IgE to egg protein.
•
Results are given in grades from 0 (negative) to 6 (strongly positive)
•
Useful for food allergies, inhaled allergens (e.g. Pollen) and wasp/bee 
venom
•
Blood tests may be used when skin prick tests are not suitable, for 
example if there is extensive eczema or if the patient is taking 
antihistamines
Skin patch testing
•
Useful for contact dermatitis.
•
Around 30-40 allergens are placed on the back. 
•
Irritants may also be tested for. 
•
The patches are removed 48 hours later with the results being read 
by a dermatologist after a further 48 hours

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad
Chapter 15

 Basic sciences Immunology
 
If a history of anaphylaxis is given it would not be appropriate to perform a skin prick test, 
thus Radioallergosorbent test (RAST) is the most appropriate first-line test to investigate 
the cause of the reaction
Reasons for a false negative RAST test
•
Immediately following anaphylaxis / allergic reaction (transient drop in IgE)
•
Waning of allergen-specific IgE with time following a reaction.
•
Unstable allergens in the RAST substrates (especially food allergens)
Only IgE-mediated allergic reactions can be tested by skin prick testing
The wheal size resulting from the skin prick test is an excellent predictor of a positive food 
challenge to peanuts
__________________________________________________________
Latex allergy
Definition
•
A type I or type IV hypersensitivity to latex-based products (e.g., exam gloves, condoms)
Epidemiology
•
8–12% of health care workers are affected
•
NHS trusts in the UK have moved away from the routine use of latex gloves precisely 
because of the risk of allergy. As a result, latex allergy in hospital is now very rare in the 
UK.
•
Latex allergy is more common in children with myelomeningocele spina bifida.
Pathophysiology
•
Sensitivity to latex may cause several problems:
type I hypersensitivity (anaphylaxis)

it is very unlikely that a latex allergy would explain an anaphylaxis 
during anaesthetic induction (latex allergies typically used to commence 
when a surgeon began handling internal organs).
type IV hypersensitivity (allergic contact dermatitis)

Type 4 hypersensitivity is usually due to accelerators or chemicals used in 
the manufacturing process, whereas type 1 hypersensitivity is due to the 
latex proteins themselves
irritant contact dermatitis
Latex-fruit syndrome
•
It is recognised that many people who are allergic to latex are also allergic to fruits, 
particularly banana, pineapple, avocado, chestnut, kiwi fruit, mango, passion fruit and 
strawberry. However, bananas are the most commonly associated with 
latex/rubber allergy
MRCPUK part-1-May 2016 exam: A nurse who is known to have an allergy to latex 
develops a widespread urticarial rash and facial oedema shortly after eating lunch. Which 
food is she most likely to have consumed? Banana
Latex allergy can be associated with certain foods such as bananas, avocado, kiwi and 
melon.

Notes & Notes for MRCP                          
By Dr. Yousif Abdallah Hamad

__________________________________________________________
Serum Sickness 
Definition
•
Serum sickness is a classic example of a type III hypersensitivity reaction, which usually 
develops as a complication of antitoxin or antivenom administration.
Aetiology
•
Antivenom or antitoxin containing animal proteins
•
Medications most frequently antibiotics (e.g., penicillin, amoxicillin, cefaclor, trimethoprimsulfamethoxazole)
•
Infections: Hepatitis B virus
Pathophysiology 
•
exposure to an antigen (e.g., antivenom, drug) → formation of antibodies → deposition of 
antibody-antigen complexes in tissue → activation of the complement cascade → tissue 
damage and systemic inflammation
Features
•
Symptoms appear 1–2 weeks following initial exposure (because antibodies take several 
days to form), and usually resolve within a few weeks after discontinuation of the offending 
agent.
•
Fever
•
Rash (urticarial or purpuric)
•
Arthralgias
•
Lymphadenopathy
Subtypes and variants: serum sickness-like reaction
•
much more common than actual serum sickness
•
Aetiology: similar to that of serum sickness
•
Infections (e.g., hepatitis B, rabies)
•
Medications that can act as haptens (e.g., allopurinol, cephalosporins, penicillin).
Diagnostics: Urinalysis may show mild proteinuria.
Treatment: Stop the offending agent.