# 8.7.3 Coccidioidomycosis 1361

# 8.7.3 Coccidioidomycosis 1361

8.7.3  Coccidioidomycosis
1361
treatment. An approach similar to that recommended for immuno-
suppressed patients is still recommended, such as an initial (2–​4 weeks) 
of amphotericin B-​based induction therapy followed by 8–​10 weeks of 
fluconazole. More prolonged use (4–​6 weeks) of amphotericin B and 
flucytosine might be more rapidly curative but is also more toxic.
Cryptococcal meningitis in AIDS requires lifelong suppressive 
therapy unless the immunosuppression is reversed with effective 
treatment of HIV infection. In that circumstance, treatment can 
be discontinued if the CD4+ lymphocyte count increases to over 
200 cells/​mm3. In other immunocompromised patients, suppressive 
treatment for 6 to 12 months can be given. Effective antiretroviral 
therapy might also sufficiently improve the immune system such 
that there is an immunological response to the fungal infection. This 
might be associated with clinical deterioration and apparent relapse 
of symptoms; this immune reconstitution inflammatory syndrome 
(IRIS) should not prompt change in antifungal therapy and patients 
should receive anti-​inflammatory therapy, as needed. It has also been 
described in transplant patients whose immunosuppressive therapy 
is decreased during management of the cryptococcal infection.
Timing of initiation of antiretroviral therapy in HIV-​infected pa-
tients is a very important consideration. Recent randomized clinical 
trials suggest that early (within two weeks of diagnosis) initiation of 
antiretroviral therapy is associated with an increased mortality in 
patients with cryptococcal meningitis, possibly because of the devel-
opment of immune reconstitution syndrome. This means that there 
is often a delay in starting antiretrovirals for a few weeks to avoid 
this complication. However, recent studies suggest that screening 
for CrAg, with preemptive fluconazole for those infected, before 
starting antiretrovirals reduces IRIS and mortality.
Fluconazole, 200 mg daily, is the suppressive treatment of choice. 
Fluconazole, in dosages ranging from 400 mg weekly to 200 mg daily, 
and itraconazole, 100 mg twice daily, are very effective in preventing 
invasive cryptococcal infections, especially in HIV-​positive patients 
with CD4 counts less than 50–​100 cells/​mm3. However, because of 
the relative infrequency of invasive fungal infections, antifungal 
prophylaxis does not prolong life and is not routinely recommended 
where antiretroviral therapy is readily available. An approach using 
CrAg screening and pre-​emptive antifungal therapy in ART-​naive 
individuals with a CD4 count of less than 100 cells/​mm3 is currently 
being evaluated in high incidence settings.
FURTHER READING
Beardsley J, et al. (2016). Adjunctive dexamethasone in HIV-​associated 
cryptococcal meningitis. N Engl J Med, 374, 542–​54.
Bicanic T, Harrison TS (2005). Cryptococcal meningitis. Br Med Bull, 
72, 99–​118.
Boulware D, et al. (2014). ART initiation within the first 2 weeks of 
cryptococcal meningitis is associated with higher mortality:  a 
multisite randomized trial. N Engl J Med, 370, 2487–​98.
Datta K, et al. (2009). Spread of Cryptococcus gattii into Pacific north-
west region of the United States. Emerg Infect Dis, 15, 1185–​91.
Day JN, et  al. (2013). Combination antifungal therapy for  
HIV-​associated cryptococcal meningitis. N Engl J Med, 368, 
1291–​302.
Ellis DH, Pfeiffer TJ (1990). Ecology, lifecycle, and infections propa-
gule of Cryptococcus neoformans. Lancet, 36, 923–​5.
Graybill JR, et  al. (2000). Diagnosis and management of increased 
intracranial pressure in patients with AIDS and cryptococcal men-
ingitis. Clin Infect Dis, 30, 47–​54.
Molloy SF, et al. (2018). Antifungal combinations for treatment of 
cryptococcal meningitis in Africa. N Engl J Med, 378, 1004–17.
Perfect JR, et al. (2010). Clinical practice guidelines for the manage-
ment of cryptococcal disease: 2009 update by the Infectious Diseases 
Society of America. Clin Infect Dis, 50, 291–​322.
Rajasingham R, et al. (2017). Global burden of disease of HIV-
associated cryptococcal meningitis: an updated analysis. Lancet 
Infect Dis, 17, 873–81.
Shelbourne S, et al. (2005). The role of immune reconstitution inflamma-
tory syndrome in AIDS-​related Cryptococcus neoformans disease in the 
era of highly active antiretroviral therapy. Clin Infect Dis, 40, 1049–​52.
Speed B, Dunt D (1995). Clinical and host differences between infec-
tion of the two varieties of Cryptococcus neoformans. Clin Infect 
Dis, 21, 28–​34.
Temfack E, et al. (2018). Impact of routine cryptococcal antigen 
screening and targeted preemptive fluconazole therapy in 
antiretroviral-naive human immunodeficiency virus-infected 
adults with CD4 cell counts < 100/ul: A systematic review and meta-
analysis. Clin Infect Dis, ciy567, https://doi.org/10.1093/cid/ciy567
8.7.3  Coccidioidomycosis
Gregory M. Anstead
ESSENTIALS
Coccidioidomycosis results from inhalation of arthroconidia of 
Coccidioides spp., which are soil fungi endemic to the south-​western 
United States of America and parts of Latin America. Most infections 
are asymptomatic, but primary infection may resemble community-​
acquired pneumonia, sometimes with hypersensitivity manifestations 
such as erythema nodosum, erythema multiforme, and arthritis. 
Acute pulmonary infection usually resolves spontaneously, but—​
especially in immunocompromised patients, African Americans, and 
Filipinos—​it may progress to persistent pulmonary disease or dissem-
inate to skin, soft tissues, the osteoarticular system, and the central 
nervous system. Diagnosis is by culture, histopathology, or serology. 
Fluconazole and itraconazole are usually the initial drugs of choice, 
with amphotericin B reserved for severe pulmonary and dissemin-
ated disease, and in pregnancy. In refractory cases, posaconazole, 
voriconazole, and isavuconazole are alternative antifungal agents.
Introduction
Coccidioidomycosis results from inhalation of arthroconidia of di-
morphic fungi of the genus Coccidioides, of which the two species are 
C. immitis (Californian isolates) and C. posadasii (non-​Californian 


section 8  Infectious diseases
1362
isolates). Both species produce similar clinical effects. These soil fungi 
inhabit semiarid to arid areas in the south-​western United States of 
America and parts of Latin America. Hyperendemic areas include 
the San Joaquin Valley (California) and Pima, Pinal, and Maricopa 
counties in Arizona. There are approximately 150 000 infections per 
year in the United States of America, and about one-​third of those 
infected become symptomatic.
Persons at risk
Residence in or travel to endemic areas is the key risk factor for ac-
quiring coccidioidomycosis. Arizona accounts for about 60% of re-
ported American cases. At increased risk of more serious disease 
are people of Filipino or African American descent, those with 
blood group B, those exposed to soil, and the immunocompromised 
(organ transplant recipients; HIV infection, cancer, and diabetes; 
pregnancy; recipients of tumour necrosis factor α antagonists). 
Outbreaks may follow dust storms, earthquakes, droughts, and ac-
tivities causing soil disruption, such as archaeological digs. Recent 
data from Arizona have defined a primary exposure season with 
peaks in May and September, which correlates with seasonal rainfall.
Pathogenesis
Inhaled coccidioides arthroconidia are ingested by pulmonary 
macrophages and, over 3 days or more, convert to thick-​walled 
round spherules containing hundreds of endospores. When spher-
ules rupture, the endospores may disseminate to meninges, bones, 
skin, or other soft tissues. Resolution of coccidioidomycosis de-
pends on intact cell-​mediated immunity.
Diagnosis
This is based on clinical findings supported by microbiological, 
histopathological, and/​or serological evidence. Coccidioides mycelia 
grow readily on many culture media. They are formed by barrel-​
shaped arthroconidia, with intercalated ‘ghost’ cells. The mycelia are 
extremely fragile, and the minimum infective dose approaches one 
arthroconidium, so these fungi must be handled with great caution 
by laboratory personnel. Coccidioides is considered a potential agent 
for bioterrorism, and there are strict rules for its handling in the 
United States. Histopathological findings can vary, from abscesses 
with many spherules, large endospores, and neutrophils (in uncon-
trolled disease) to well-​formed granulomas with few organisms (in 
patients with competent cell-​mediated immunity). These findings 
are readily seen with haematoxylin and eosin staining.
Serological methods are often used for the diagnosis of coccidi-
oidomycosis. IgM antibodies, detected by the tube precipitin (TP) 
test or immunodiffusion TP, appear within the first few weeks of in-
fection and clear within 1 or 2 months. IgG is detectable by comple-
ment fixation (CF) or immunodiffusion CF after several months and 
persists for years. Serum CF titres of 1:16 or higher suggest deterior-
ation or dissemination. In coccidioidal meningitis, any positive titre 
confirms the diagnosis; the cerebrospinal fluid IgG titre is positive 
more than 75% of the time, whereas cerebrospinal fluid cultures are 
positive in less than 50% of patients.
More recently, enzyme-​linked immunosorbent assay (ELISA) has 
been used for coccidioidal IgG and IgM antibodies. ELISA optical 
density correlates roughly with immunodiffusion CF titre. Negative 
ELISA results do not require confirmation by other tests. However, 
positive tests may not be entirely specific, and should be confirmed 
by immunodiffusion or complement fixation tests. A diagnostic test 
based on the detection of coccidioidal antigens in the serum and 
urine has been commercialized by Miravista Laboratories. However, 
problems with this test include low sensitivity and cross-​reaction 
with histoplasma and blastomyces antigens.
Clinical presentation
Primary infection
About 60% of subjects are asymptomatic. Symptomatic primary infec-
tion presents from 1 to 3 weeks after exposure, with fever, cough, and 
pulmonary infiltrates, and may be accompanied by hypersensitivity 
manifestations, such as erythema nodosum, erythema multiforme, and 
arthritis. Eosinophilia or eosinophilic pleocytosis (in meningitis) may be 
present. Usually, however, the clinical syndrome of primary coccidioidal 
pneumonia is similar to other forms of community-​acquired pneu-
monia, and this contributes to the difficulty of making a specific diag-
nosis. In high-​incidence areas, such as Pima or Maricopa Counties in 
Arizona, coccidioides is the cause of up to 29% of community-​acquired 
pneumonia. It is now recommended that patients presenting with 
community-​acquired pneumonia in highly endemic areas should be 
tested for coccidioidomycosis. Although antifungal therapy is not re-
quired for the treatment of primary infection, it is now understood that 
primary coccidioidal pneumonia can be an infection with significant 
morbidity, resulting in prolonged respiratory symptoms and delays in 
return to normal activity levels. Treatment of primary disease should be 
undertaken with immunocompromised patients. Recent appreciation 
of the clinical significance of primary coccidioidomycosis makes up a 
substantial percentage of community-​acquired pneumonias in Arizona 
again raises the question whether fluconazole should be used more rou-
tinely for primary disease.
In addition to uneventful resolution, there are various outcomes 
of primary coccidioidomycosis, which include those given below.
Coccidioma formation
Pulmonary infiltrates may contract into an asymptomatic mass 
(coccidioma), which can persist for years. In an immunocompetent 
person, antifungal therapy is unnecessary.
Progressive/​persistent pneumonia
Heavily exposed immunosuppressed patients may develop acute 
respiratory failure. Amphotericin B treatment is recommended. 
Pneumonia persists more than 2 months, with extensive infiltrates 
and, often, cavitation. Initial treatment with amphotericin B is re-
commended if the patient is severely ill. The Infectious Disease 
Society of America guidelines suggest between 3 and 6 months for 
the duration of therapy, but we would favour treatment for more 


8.7.3  Coccidioidomycosis
1363
than 6 months after resolution of symptoms, and for more than a 
year with diffuse miliary disease. Conversion to an oral azole is ap-
propriate when the patient is improving.
Chronic pulmonary coccidioidomycosis
This occurs in about 5% of patients with symptomatic primary 
coccidioidomycosis and may have a fluctuating course over years. 
Nodular lesions may cavitate, with surrounding infiltrates and fi-
brosis. Cavitary disease might be asymptomatic or be associated 
with rupture and pneumothorax, haemorrhage, or secondary infec-
tion. Cavities smaller than 2.5 cm in diameter tend to resolve, while 
cavities larger than 5 cm persist. Cavities may remain stable for 
years or become infected with Aspergillus, or fluctuate with inter-
mittent infiltrates and fibrocavitary disease. Chronic pulmonary 
coccidioidomycosis can progressively destroy the lungs and re-
quires medical therapy with either fluconazole or itraconazole. The 
appropriate duration of therapy is uncertain. If large asymptomatic 
cavities persist for several years, resection should be considered. 
Coccidioidal mycetoma can occur in pre-​existing cavities and is 
treated by resection.
Disseminated coccidioidomycosis
Pleura and pericardium may be invaded during pulmonary coc-
cidioidomycosis. Haematogenous dissemination occurs within 
a few months after infection and may involve skin, soft tissue, 
osteoarticular tissue, and meninges (Figs. 8.7.3.1–​8.7.3.3). 
Papules, nodules, abscesses, verrucous plaques, or ulcers are 
seen. Medical therapy is often combined with surgical therapy 
to debulk lesions.
In chronic coccidioidomycosis, fluconazole at 400 or 800 mg/​day 
or itraconazole at 200 mg twice daily are used but death may ensue 
despite intensive medical and surgical intervention.
Osteoarticular disease
Any bone or joint may be targeted, but those that are weight bearing 
are more vulnerable (Fig. 8.7.3.4). Infection can destroy the verte-
bral body, with collapse and joint instability. Paraspinous abscesses 
should be drained and, if necessary, the joint(s) stabilized.
Fig. 8.7.3.2  Ulcerative ankle lesion with underlying osteomyelitis in a 
patient with coccidioidomycosis.
Fig. 8.7.3.4  Coccidioidal arthropathy.
Copyright R. Hay.
Fig. 8.7.3.3  Abscesses on the chest in a patient with 
coccidioidomycosis.
Fig. 8.7.3.1  CT of paraspinous abscess in a patient with 
coccidioidomycosis.